DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfp-4

DIOPT Version :9

Sequence 1:NP_001286864.1 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_503066.1 Gene:lhfp-4 / 184971 WormBaseID:WBGene00009155 Length:229 Species:Caenorhabditis elegans


Alignment Length:195 Identity:43/195 - (22%)
Similarity:77/195 - (39%) Gaps:59/195 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQSSVGIYTRCKVMQEGGFQCGRF 72
            :...:|.||.|...:|..:||:.|.|:     |:|                     |||: .|.:
 Worm    18 VVGAIWVLCGLCTTVLQTLALIHPTWI-----GSD---------------------EGGY-FGLY 55

  Fly    73 DLDGLATDSSVYPNEWK------AAMFFVMLGFSLLSVTVI-------LTLITCCRQSACGKSIH 124
            |..|    :|..|  |.      .:|:|.:..|.:|:.||:       :.|:...|..      |
 Worm    56 DYCG----TSECP--WSPFRVRPLSMWFEISAFLVLAATVLSFLAIFSILLLVLLRDR------H 108

  Fly   125 NMTACA--QVVAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTF 187
            ....|:  ...|.:.|:.|..|:|.||...|::.:|  :::.:....|.|...:   ::.::|.|
 Worm   109 AFILCSWLHFFAFVFMLAGCVLYPYGWENPRVREIC--ESKKYQLGLCQIRWPY---LLAMVLVF 168

  Fly   188  187
             Worm   169  168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_001286864.1 L_HGMIC_fpl 10..195 CDD:287244 43/193 (22%)
lhfp-4NP_503066.1 L_HGMIC_fpl 19..183 CDD:287244 43/194 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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