DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15861 and SCARF1

DIOPT Version :9

Sequence 1:NP_001286863.1 Gene:CG15861 / 37990 FlyBaseID:FBgn0035084 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_003684.2 Gene:SCARF1 / 8578 HGNCID:16820 Length:830 Species:Homo sapiens


Alignment Length:184 Identity:45/184 - (24%)
Similarity:60/184 - (32%) Gaps:68/184 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QCVRRCNIVCLNGVCFED-GSCPCADQYMAGNP--DGLVCAAECLPG-----CVAAGGYCAAPDL 104
            ||...|.....|..|..| |||...:      |  :|..|...||||     |.....:|...:.
Human   260 QCAHSCGRCKHNEPCSPDTGSCESCE------PGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEA 318

  Fly   105 CVCREDRHYYFDPLSQKCRH-----RAPRLLDPC----LGR--------CTHGNCSS-DGRCICA 151
            |          :|.:..|:.     ..||..|||    .|.        |..|:|.: .|.|:|:
Human   319 C----------EPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTCPTCVQGSCDTVTGDCVCS 373

  Fly   152 QGYELRDSLLHGQQCMPICDHNCGPRAY----CFAPNLCACRHKQHHYAHNGIC 201
            .||           ..|.|:.:| |..:    |..|  |.|        ..|:|
Human   374 AGY-----------WGPSCNASC-PAGFHGNNCSVP--CEC--------PEGLC 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15861NP_001286863.1 None
SCARF1NP_003684.2 CSRNP_N <100..135 CDD:292638
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..539
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..830
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.