DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG15861 and Scarf1

DIOPT Version :9

Sequence 1:	NP_001286863.1	Gene:	CG15861 / 37990	FlyBaseID:	FBgn0035084	Length:	205	Species:	Drosophila melanogaster
Sequence 2:	NP_001004157.2	Gene:	Scarf1 / 380713	MGIID:	2449455	Length:	820	Species:	Mus musculus

Alignment Length:	222	Identity:	46/222 - (20%)
Similarity:	65/222 - (29%)	Gaps:	98/222 - (44%)

- Green bases have known domain annotations that are detailed below.

  Fly    48 QCVRRCNIVCLNGVC-FEDGSCPCADQYMAGNPDGLVCAAECLPG-----CVAAGGYCAAPDLC- 105
            :|.|:|.  |:.|.| ...|.|.|...:     .|:.|...|.||     |..:.|:|.....|
Mouse   220 ECSRKCQ--CVRGQCSVTSGHCSCPPGF-----HGIRCELPCNPGHYGAQCKESCGHCELNATCS 277

  Fly   106 ----------------VCREDRHYYFDP-----LSQKCRHRAP--RLLDPC---LGRCTH----- 139
                            .|::       |     ..::|..:.|  ||.:||   .|.|.|
Mouse   278 PVTGNCESCKPGWNGTQCKQ-------PCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGW 335

  Fly   140 ---------------------------GNCSS-DGRCICAQGYELRDSLLHGQQCMPIC-----D 171
                                       |.|.: .|.|:|:.||       .|..|...|     .
Mouse   336 LGHRCENPCPLGTFGKGCSSTCPACAQGTCDAVTGECVCSAGY-------WGTSCNSSCPAGFHG 393

  Fly   172 HNCGPRAYCFAPNLC-----ACRHKQH 193
            :||.....| ...||     .|:..:|
Mouse   394 NNCSMPCQC-PEGLCHPVSGTCQLGRH 419

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID
CG15861	NP_001286863.1	None
Scarf1	NP_001004157.2	PHA03247	<541..781	CDD:223021
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	549..685
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	715..820
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1218
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900