DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15861 and Pear1

DIOPT Version :9

Sequence 1:NP_001286863.1 Gene:CG15861 / 37990 FlyBaseID:FBgn0035084 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001128431.1 Gene:Pear1 / 295293 RGDID:1305653 Length:1033 Species:Rattus norvegicus


Alignment Length:260 Identity:59/260 - (22%)
Similarity:73/260 - (28%) Gaps:113/260 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QLCSDYEMLVVNTRQCVRRCNIVCLNGVCFEDGSCPCADQYMAGNPDGLVCAAECLPG------- 91
            |.|..|   ..::..||..|...|::|.|.....|.||..:...:     |::||.||       
  Rat    87 QCCGGY---YESSGACVPLCAQECVHGRCVAPNRCQCAPGWRGDD-----CSSECAPGMWGPQCD 143

  Fly    92 ----------CVAAGGYCAAP---------DLC-------VCREDRHYY---FDPLSQKC----R 123
                      |....|.|..|         ..|       .|:.|.|.|   .||....|    .
  Rat   144 RLCLCGNSSSCDPRSGVCFCPSGLQPPDCLQPCPDGHYGPACQFDCHCYGASCDPRDGACFCPPG 208

  Fly   124 HRAPRLLDPC------------------------LGRCT------------------HG-NCSSD 145
            ...|....||                        .|.|:                  || ||:.:
  Rat   209 RTGPSCNVPCSQGTDGFFCPRTYPCQNGGVPQGSQGSCSCPPGWMGVICSLPCPEGFHGPNCTQE 273

  Fly   146 -------------GRCICAQGY---ELRDSL---LHGQQCMPICDHNCGPRAYCFAPN-LCACRH 190
                         |:|.||.||   ..|:..   ..||.|...||  |.|.|.||..| .|.|.|
  Rat   274 CRCHNGGLCDRFTGQCHCAPGYIGDRCREECPVGRFGQDCAETCD--CAPGARCFPANGACLCEH 336

  Fly   191  190
              Rat   337  336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15861NP_001286863.1 None
Pear1NP_001128431.1 EMI 25..93 CDD:284877 3/8 (38%)
EGF_CA 535..580 CDD:304395
Laminin_EGF 620..665 CDD:278482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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