DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15861 and Scarf2

DIOPT Version :10

Sequence 1:NP_611984.1 Gene:CG15861 / 37990 FlyBaseID:FBgn0035084 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_038944006.1 Gene:Scarf2 / 287949 RGDID:1306013 Length:838 Species:Rattus norvegicus


Alignment Length:187 Identity:49/187 - (26%)
Similarity:59/187 - (31%) Gaps:52/187 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QCVRRCNIVCLNGVCFE-DGSCPCADQYMAGNPDGLVCAAECLPGCVAAG-----GYCAAPDLCV 106
            :|.|.|.  |..|.|.. ||:|.|...|.     |..|...|..|....|     |.|.....|.
  Rat   231 RCDRYCQ--CFRGRCHPVDGTCACDPGYR-----GKYCREPCPAGFYGLGCRRRCGQCKGQQPCT 288

  Fly   107 CREDRHYYFDP---------------LSQKCRHRAPRLLDPC---------LGRCTHGNCSSDG- 146
            ..|.|....:|               ..:.|.||.|    ||         .|:|||.|....| 
  Rat   289 VVEGRCLTCEPGWNGTKCDQPCATGFYGEGCGHRCP----PCRDGHACNHVTGKCTHCNAGWIGD 349

  Fly   147 RC--ICAQGYELRDSLLHGQQCMPICDHNCGPRAYCFAPNLCACRHKQHHYAHNGIC 201
            ||  .|:.|       .:|:.|..:|. :||.....|....|.|....|....|..|
  Rat   350 RCETKCSNG-------TYGEDCAFVCS-DCGSGHCDFQSGRCLCSPGVHGPHCNVTC 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15861NP_611984.1 None
Scarf2XP_038944006.1 PHA03247 <683..837 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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