DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15861 and Scarf2

DIOPT Version :9

Sequence 1:NP_001286863.1 Gene:CG15861 / 37990 FlyBaseID:FBgn0035084 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_036015777.1 Gene:Scarf2 / 224024 MGIID:1858430 Length:838 Species:Mus musculus


Alignment Length:187 Identity:50/187 - (26%)
Similarity:61/187 - (32%) Gaps:52/187 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QCVRRCNIVCLNGVCFE-DGSCPCADQYMAGNPDGLVCAAECL-----PGCVAAGGYCAAPDLCV 106
            :|.|.|.  |.:|.|.. ||:|.|...|.     |..|...|.     |||....|.|.....|.
Mouse   231 RCDRYCQ--CSHGRCHPVDGTCACDPGYR-----GKYCREPCPAGFYGPGCRRRCGQCKGQQPCT 288

  Fly   107 CREDRHYYFDP---------------LSQKCRHRAPRLLDPC---------LGRCTHGNCSSDG- 146
            ..|.|....:|               ..:.|.||.|    ||         .|:|||.|....| 
Mouse   289 VVEGRCLTCEPGWNGTKCDQPCATGFYGEGCGHRCP----PCRDGHACNHVTGKCTHCNAGWIGD 349

  Fly   147 RC--ICAQGYELRDSLLHGQQCMPICDHNCGPRAYCFAPNLCACRHKQHHYAHNGIC 201
            ||  .|:.|       .:|:.|..:|. :||.....|....|.|....|....|..|
Mouse   350 RCETKCSNG-------TYGEDCAFVCS-DCGSGHCDFQSGRCLCSPGVHGPHCNVTC 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15861NP_001286863.1 None
Scarf2XP_036015777.1 exchanger_TraA <74..431 CDD:411343 50/187 (27%)
PHA03307 526..>836 CDD:223039
PHA03247 <683..838 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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