DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tina-1 and AT3G02910

DIOPT Version :10

Sequence 1:NP_611983.2 Gene:Tina-1 / 37989 FlyBaseID:FBgn0035083 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_566187.1 Gene:AT3G02910 / 821189 AraportID:AT3G02910 Length:187 Species:Arabidopsis thaliana


Alignment Length:170 Identity:56/170 - (32%)
Similarity:72/170 - (42%) Gaps:21/170 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQAKKVSSALSKLFVYGALKYGQPSNSILASS--GNGFAKFWCKATTTQKLPLVIATRYNIPFL 63
            ||......:..:.:|.||.||.|. ||.:|...  .:|.|.|.....|..|.|||... |.:|||
plant     1 MGHETMTPATTTLVFTYGTLKRGF-SNHVLMQDLIRSGDASFKGVYQTLDKYPLVCGP-YRVPFL 63

  Fly    64 LNKPGVGYYVTGEIYEVDDRMLNSLDNLEDCE---------EIYTREMHDMNIGVGEGTVP--CW 117
            |||||.||:|.||:|.|..|.|:.||.||...         .:...|..:...|..|...|  |.
plant    64 LNKPGSGYHVNGELYAVSPRGLSRLDELEGISRGHYIRQPIRLAAAEEEEEEEGDLETEAPSSCV 128

  Fly   118 V---YLLQKYPENLLSL---RYLSSYENSTTHPYIMRHRR 151
            |   |..:.|.|.|...   |...:|..:....|:.|:.|
plant   129 VEAYYAHKSYEEELWRRNRGRSFGAYTENEARGYVKRNDR 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tina-1NP_611983.2 GGACT 14..131 CDD:428763 49/132 (37%)
AT3G02910NP_566187.1 GGACT 14..>106 CDD:428763 39/93 (42%)

Return to query results.
Submit another query.