DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3760 and Cdv3l1

DIOPT Version :10

Sequence 1:NP_726501.1 Gene:CG3760 / 37987 FlyBaseID:FBgn0022343 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_574528.1 Gene:Cdv3l1 / 499235 RGDID:1565730 Length:159 Species:Rattus norvegicus


Alignment Length:159 Identity:43/159 - (27%)
Similarity:62/159 - (38%) Gaps:24/159 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PSAPDGGNYNEDDEDSNGYDNADVNKERVGHGPWKKVVPAEEVMQIPVPVEVEKHSSKTYVSPAL 183
            |||.| ..|.:..|......|...:......|||.|..   .|...|.||.|.:.......|...
  Rat     9 PSAHD-NQYTKYTEQRKNIKNLQGSGAEKSSGPWNKTA---LVQAPPAPVTVTETPEPAMPSGVY 69

  Fly   184 RYSQQAGSGLGGGPTGGALRPRR----AAPDITNTEFFPTL-SAARPEEQRK--KKNEPAFEEVR 241
            |            |.|..|...|    ..|:|.:...||:| |.|:..|.|.  |:.|.:||.||
  Rat    70 R------------PPGARLTTTRKTPQGPPEIYSDTQFPSLQSTAKHVESRNRDKEMEKSFEVVR 122

  Fly   242 HGSRF-QRVQESTAAPVAASNRFQSLDDE 269
            |.:|. :.|.::.|..:...|::..|:::
  Rat   123 HKNRVREEVSKNQALKLELDNQYAVLENQ 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3760NP_726501.1 CDV3 86..223 CDD:464669 28/108 (26%)
Cdv3l1XP_574528.1 CDV3 <33..103 CDD:464669 21/84 (25%)

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