DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3760 and Cdv3

DIOPT Version :10

Sequence 1:NP_726501.1 Gene:CG3760 / 37987 FlyBaseID:FBgn0022343 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001420782.1 Gene:Cdv3 / 315970 RGDID:1359113 Length:281 Species:Rattus norvegicus


Alignment Length:315 Identity:80/315 - (25%)
Similarity:117/315 - (37%) Gaps:88/315 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAE-----LDDFFAKKDKKKSKNKTKFVTADEMVKNLEDGT-KREVVKPKKP----EVAAGGVAV 55
            |||     ||:||||:||||.|.::      ....|...|. ........:|    .:.:|..:.
  Rat     1 MAETEERSLDNFFAKRDKKKKKERS------SRAANAASGAGGSSAAAGSRPGDGGSLGSGARSG 59

  Fly    56 VGENENSGTKVPE----------------------SAPP-------VEEEWKEFEEEQRKDYSGL 91
            .|.:..||.:..:                      ||.|       .|.||||||::: .|||||
  Rat    60 DGGSSGSGARSGDGGSLGSGARSGDGGTSRSGDGGSAGPGGKAITKDENEWKEFEQKE-VDYSGL 123

  Fly    92 KIGQLSTISSARSRTAQESSESQAARVPSAPDGGNYNEDDEDSNGYDNADVNKERVGHGPWKKVV 156
            ::                    ||.::....|..|...:|...|..:....:......|||.|..
  Rat   124 RV--------------------QAMQISEKEDDDNEKREDPGDNWEEGGGGSGAEKSSGPWNKTA 168

  Fly   157 PAEEVMQIPVPVEVEKHSSKTYVSPALRYSQQAGSGLGGGPTGGALRPRR----AAPDITNTEFF 217
               .|...|.||.|.:.......|...|            |.|..|...|    ..|:|.:...|
  Rat   169 ---LVQAPPAPVTVTETPEPAMPSGVYR------------PPGARLTTTRKTPQGPPEIYSDTQF 218

  Fly   218 PTL-SAARPEEQRK-KKNEPAFEEVRHGSRF-QRVQESTAAPVAASNRFQSLDDE 269
            |:| |.|:..|.|| |:.|.:||.|||.:|. :.|.::.|..:...|::..|::|
  Rat   219 PSLQSTAKHVESRKDKEMEKSFEVVRHKNRVREEVSKNQALKLELDNQYAVLENE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3760NP_726501.1 CDV3 86..223 CDD:464669 32/141 (23%)
Cdv3NP_001420782.1 CDV3 106..226 CDD:464669 39/155 (25%)

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