DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30427 and FAR6

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001326776.1 Gene:FAR6 / 824837 AraportID:AT3G56700 Length:548 Species:Arabidopsis thaliana


Alignment Length:516 Identity:111/516 - (21%)
Similarity:209/516 - (40%) Gaps:116/516 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRL-EEMFKLPIFQR 71
            :..:.:.|:..:|||:||:.|||:||||.....:.::.::.|.|..::...|| :|:....:|:.
plant    77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISSDLFKL 141

  Fly    72 IKDERPE-----MLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDM 131
            :|.....     |.:::....||:..|.||:..|....::|..:::.........:.....|:.:
plant   142 LKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIKSEIANMISEEIDVIISCGGRTTFDDRYDSALSV 206

  Fly   132 NLLGTRRALNVAKEMKQLEAFIHLSTAF--------------C---NCDQD--------VMYEKV 171
            |.||..|.|:..|..::|:.|:|.|||:              |   |...|        :..|.|
plant   207 NALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGENITSDLNIKSELKLASEAV 271

  Fly   172 YEFPHKPEDLMRLAE----------WMDVKTLDAITPDLLKPHPNTYTYSKRLAELLVRDHYESM 226
            .:|..: |::.:|.|          |                 .|:||::|.:.|.::.....::
plant   272 RKFRGR-EEIKKLKELGFERAQHYGW-----------------ENSYTFTKAIGEAVIHSKRGNL 318

  Fly   227 PVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGVIRSMICNGELKSEVIPVDIAINGLIL 291
            ||:|.||||:..:..||.|||:........:::...||.|.....:.:...::||||:..|..| 
plant   319 PVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMDIIPVDMVANAAI- 382

  Fly   292 LPYHNSLAEKRPLQIP---VYNLTVDD--AKKRTWKWIMDVGRDLGIKYPFEVGLWYPDGNMTSS 351
                 :...|....:|   |||||...  ...|..| ::|:.......:|.|             
plant   383 -----AAMAKHGCGVPEFKVYNLTSSSHVNPMRAGK-LIDLSHQHLCDFPLE------------- 428

  Fly   352 KFYHTICTILFMWLPAYLIDFL--------------------LLIFGQRRFMIRVQTKIAVGLEV 396
               .|:..:..|.:.:.|..|.                    |...|:|:  :.....:|...|.
plant   429 ---ETVIDLEHMKIHSSLEGFTSALSNTIIKQERVIDNEGGGLSTKGKRK--LNYFVSLAKTYEP 488

  Fly   397 LQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSI-LGG--RQYVMKE 454
            ..||..|   |.:|:...:.:|:...:::.|..:...: |:|:..|:: |.|  ::::.|:
plant   489 YTFFQAR---FDNTNTTSLIQEMSMEEKKTFGFDIKGI-DWEHYIVNVHLPGLKKEFLSKK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 85/351 (24%)
Sterile 364..453 CDD:281068 19/111 (17%)
FAR6NP_001326776.1 PLN02996 77..539 CDD:215538 110/508 (22%)
FAR-N_SDR_e 84..426 CDD:187547 87/366 (24%)
FAR_C <471..539 CDD:176924 16/73 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.930

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