DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG30427 and FAR8

DIOPT Version :9

Sequence 1:	NP_001246512.1	Gene:	CG30427 / 37986	FlyBaseID:	FBgn0043792	Length:	506	Species:	Drosophila melanogaster
Sequence 2:	NP_190042.2	Gene:	FAR8 / 823581	AraportID:	AT3G44560	Length:	496	Species:	Arabidopsis thaliana

Alignment Length:	319	Identity:	87/319 - (27%)
Similarity:	159/319 - (49%)	Gaps:	45/319 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 YYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLE-EMFKLPIFQRIKD 74
            :.::|||.:|||:||:.||.:||:|....::.::.::.|....:|...||. |.|:..:|:.::|
plant     8 FLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKDLFKVLRD 72

  Fly    75 ERPE------MLKRVTIYQGDVTFDQLGLSGESLK-HVTENTNIVFHMAATLKLEGNLRDAIDMN 132
            ...:      :.::|....||:..|.||:...:|: .:.:..:||.::|||...:......:.:|
plant    73 NLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGIN 137

  Fly   133 LLGTRRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKP------------------- 178
            ..|....||.||:..:.:..:|:|||:      |..||....|.||
plant   138 TFGALNVLNFAKKCVKAQLLLHVSTAY------VCGEKPGLLPEKPFVMEEICNENGLQLDINLE 196

  Fly   179 EDLM--RLAEWMDVKTLDAITPDLLKP--------H--PNTYTYSKRLAELLVRDHYESMPVIIA 231
            .:||  ||.|..:....:..|...:|.        |  ||||.::|.:.|:|:.:|.|::|::|.
plant   197 RELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKSMGEMLLGNHKENLPLVII 261

  Fly   232 RPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGVIRSMICNGELKSEVIPVDIAINGLI 290
            ||:::|..:.||.|||::.:.....|:|..||||::..:.:.....::||.|:..|.:|
plant   262 RPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMI 320

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG30427	NP_001246512.1	FAR-N_SDR_e	15..321	CDD:187547	87/315 (28%)
CG30427	NP_001246512.1	Sterile	364..453	CDD:281068
FAR8	NP_190042.2	PLN02996	1..495	CDD:215538	87/319 (27%)
		FAR-N_SDR_e	12..362	CDD:187547	87/315 (28%)
		Sterile	394..495	CDD:281068
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	159	1.000	Domainoid score	I1277
eggNOG	1	0.900	-	-		E1_COG3320
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	182	1.000	Inparanoid score	I1437
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D815047at2759
OrthoFinder	1	1.000	-	-		FOG0000172
OrthoInspector	1	1.000	-	-		mtm964
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11011
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X145
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	11	10.930