DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30427 and CG17562

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster


Alignment Length:509 Identity:159/509 - (31%)
Similarity:259/509 - (50%) Gaps:53/509 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQRI 72
            :|..::.||:|:|||:||:|||::||||.:. .:|.:.::.|||||...:.|:....|..:|:.:
  Fly     5 IQRCFRSKTVFLTGATGFLGKVVIEKLLRTT-EVKRIYVLIRPKRGVEIKDRIITWSKDAVFELL 68

  Fly    73 KDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLGTR 137
            ...:||.|:||....||.....||:|....:.:.....||.|.|||::....|..|:.:|...|:
  Fly    69 LKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTRATK 133

  Fly   138 RALNVAKEMKQLEAFIHLSTAFCNCDQDVMY---EKVYEFPHKPEDL-------MRLAEWMDVKT 192
            ..:.:||||:|||||:|:||||.||   |:|   |..|     ||.|       :.:||.|..:.
  Fly   134 LMIQLAKEMRQLEAFVHVSTAFSNC---VIYNIKENFY-----PEHLNCSSDKVLAMAELMSDEL 190

  Fly   193 LDAITPDLLKPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGV 257
            ||.:...||...||||||:|.|||.::......:|:.|.||:::..|..||:.||:|||.||..:
  Fly   191 LDNMEQALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAI 255

  Fly   258 LIGAGKGVIRSMICNGELKSEVIPVDIAINGLILLPYHNSLAE-------KRPLQIPVYNLTVDD 315
            |.|..:||:|....:...::.::|||...| |.|.....::.|       :.||   :|.|...:
  Fly   256 LFGVARGVLRIATIDHHAEASLVPVDYCAN-LTLACTWKTIVEGNEMGTQETPL---IYQLAPIE 316

  Fly   316 AKKRTWKWIMDVGRDLGIKYPFEVGLWYPDGNM--------TSSKFYHTICTILFMWLPAYLIDF 372
            ..|.|....:....|.....|....:|||..:.        .::.||||        ||||..|.
  Fly   317 QNKITHGEFIRHALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHT--------LPAYFFDL 373

  Fly   373 LLLIFGQRRFMIRVQTKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDY 437
            .|.:.|::..:::|..||...|.:|..|..:||.|...:.:.:.:::...||||:..:...::..
  Fly   374 ALWLSGRKPRLVKVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWK 438

  Fly   438 EYMKVSILGGRQYVMKEPLT--SLPKSRIQLRFMYVLDRICKTMIISGLLYWVS 489
            ||...::.|.||::..|..|  |:.:.:..::.:.:|..     |:.|:|.:|:
  Fly   439 EYFVQALRGMRQFLGNEAPTPESIAQGKKLIKRLKLLHH-----ILQGVLCFVA 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 115/322 (36%)
Sterile 364..453 CDD:281068 25/88 (28%)
CG17562NP_650566.1 PLN02996 10..442 CDD:215538 147/452 (33%)
FAR-N_SDR_e 12..329 CDD:187547 116/329 (35%)
FAR_C 362..452 CDD:176924 29/97 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466757
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 1 0.950 - 0 Normalized mean entropy S3821
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.850

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