DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30427 and far1

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_005174372.1 Gene:far1 / 406829 ZFINID:ZDB-GENE-040426-2908 Length:518 Species:Danio rerio


Alignment Length:522 Identity:181/522 - (34%)
Similarity:290/522 - (55%) Gaps:34/522 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQRI 72
            :.|||..|.:.||||:||||||||||||.||..:|...::.|||.|:||:.|:.:|....:|.|:
Zfish     4 IPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMINCKLFDRL 68

  Fly    73 KDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLGTR 137
            ::::|:...::.....|:|...|.||.|..:.:|...|:|||.|||::....|:||:.:|:|.|:
Zfish    69 REDQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEPLKDAMQLNVLATQ 133

  Fly   138 RALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWMDVKTLDAITPDLLK 202
            :.:::|..||.||.|||:|||:.|||::::.|.||..|.....|:...||||.|.:..:||.||.
Zfish   134 KMVSLAHRMKHLEVFIHVSTAYANCDRELIEEVVYPPPVDYRKLIDTLEWMDDKLVSLMTPRLLG 198

  Fly   203 PHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGVIR 267
            ..||||||:|.|||.||:....::.:.|.|||||..:..||.|||:||.|||:|:.|.||||::|
Zfish   199 ERPNTYTYTKALAEQLVQQECGNLNIAIIRPSIVGASWKEPFPGWIDNFNGPSGIFIAAGKGILR 263

  Fly   268 SMICNGELKSEVIPVDIAINGLILLP-YHNSLAEKRPLQIPVYNLTVDDAKKRTWKWIMDVGRDL 331
            :|..:....::::|||:.||..:... |..|....||..:.|||.|........|      |.  
Zfish   264 TMRASNNAVADLVPVDVVINTTLAAAWYSGSQRHARPRSLLVYNCTTGGINPFHW------GE-- 320

  Fly   332 GIKY---------PFEVGLWYPDGNMTSSKFYHTICTILFMWLPAYLIDFLLLIFGQRRFMIRVQ 387
             ::|         |.|.....|:.|:|::...:.....:....||:|.|..|.:.|:...|::..
Zfish   321 -VEYHVISTFKRNPLEQAFRRPNVNLTTNHLINQYWIAVSHKAPAFLYDLFLRMSGREPRMMKTI 384

  Fly   388 TKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSILGGRQYVM 452
            |::...:.||::||:.||.:.:.:...:..::|:.|:::|..:...:...|||:...:|.::||:
Zfish   385 TRLHKAMMVLEYFTSHSWVWNTDNVTMLMNQMGAEDKKVFNFDVRQLHWAEYMENYCMGTKKYVL 449

  Fly   453 KEPLTSLPKSRIQLRFMYVLDRICKTMIISGLLYW-----VSQKLR-----VVDL---FRSVFHS 504
            .|.|:.||.:|..|..:..:.....|:::  :|.|     .||..|     ||.|   |.|.|.:
Zfish   450 NEELSGLPAARKHLNKLRNIRYTFNTVLV--VLIWRIFIARSQMARNIWYFVVSLCFKFLSYFRA 512

  Fly   505 ST 506
            |:
Zfish   513 SS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 128/306 (42%)
Sterile 364..453 CDD:281068 23/88 (26%)
far1XP_005174372.1 FAR-N_SDR_e 11..333 CDD:187547 131/330 (40%)
Sterile 360..450 CDD:308580 23/89 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593272
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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