DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30427 and Sgp

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster


Alignment Length:516 Identity:149/516 - (28%)
Similarity:264/516 - (51%) Gaps:33/516 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQRI 72
            :.::||||::|:||.:||:|||::||||.|. .::.|.::.|||:.:..|.|.:.....|:|:.:
  Fly     5 ILQFYKDKSVFVTGGTGFLGKVIIEKLLRST-DVRRVYLLVRPKKNETVEGRFQAWKDEPVFKIL 68

  Fly    73 KDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLGTR 137
            ...:||.||.||...||.:...||||....:.||.:..::.|.||:::....|:.|:::|...||
  Fly    69 LKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTRATR 133

  Fly   138 RALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDL-------MRLAEWMDVKTLDA 195
            ..:.:|||||.||||:|:||||.||....:.|:.|     ||.|       :...|.:....||.
  Fly   134 LMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFY-----PEHLTCPAAKVLEFNETLSPDLLDK 193

  Fly   196 ITPDLLKPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIG 260
            :.|.|:...||||||:|.|||.:::...:.:|:.:.||:|:.....||:.||:||::|...::.|
  Fly   194 MAPALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYG 258

  Fly   261 AGKGVIRSMICNGELKSEVIPVDIAINGLILLPYH----------NSLAEKRPLQIPVYNLTVDD 315
            ...|::|.:..|.:..:.::|.|...|..:...:.          :.||.|:|  .|:|.|....
  Fly   259 NTYGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKP--PPIYTLATTK 321

  Fly   316 AKKRTWKWIMDVGRDLGIKYPFEVGLWYPDGNMTSSKFYHTICTILFMWLPAYLIDFLLLIFGQR 380
            :...|:...:.:|.......|....:|||..:.|:..:...:..|.:..:|.:..|.||.|.|::
  Fly   322 SNSITFGKAVKLGIHHNHTIPVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFFDLLLRIQGKK 386

  Fly   381 RFMIRVQTKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSIL 445
            ..::|...||...|.:|..|..::::....:..|::..:...||.||..:...::..||....:.
  Fly   387 PILMRSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYFTRILS 451

  Fly   446 GGRQYVMKEPLTSLPKSRIQLRFMYVLDR-----ICKTMIISGLLYWVSQKLRVVDLFRSV 501
            |.|.::.||...:|.:::.:|...|:|.|     :|..:   |.:.|:...:...:..||:
  Fly   452 GMRVFLYKESWDTLEQAKKRLFRFYILHRSLQLVLCLAL---GKIVWILYSVIANNYIRSI 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 105/322 (33%)
Sterile 364..453 CDD:281068 21/88 (24%)
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 135/451 (30%)
FAR-N_SDR_e 12..333 CDD:187547 106/328 (32%)
FAR_C 367..457 CDD:176924 21/89 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466763
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 1 0.950 - 0 Normalized mean entropy S3821
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.850

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