DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30427 and Far2

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001334445.1 Gene:Far2 / 330450 MGIID:2687035 Length:515 Species:Mus musculus


Alignment Length:504 Identity:166/504 - (32%)
Similarity:286/504 - (56%) Gaps:19/504 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSPVQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIF 69
            :|.:..:|.:|:|.||||:||:||||:|||..:...||.:.|:.|||.|:..:.|:.::....:|
Mouse     1 MSMIAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLF 65

  Fly    70 QRIKDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLL 134
            :::|:..|.:.:::.....|:......:|.|.::.:...|||:||.|||::.:.:||:|:.:|:.
Mouse    66 EKVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVT 130

  Fly   135 GTRRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWMDVKTLDAITPD 199
            .|::.|.:|.:|.:||||||:||||.||:...:.|.:|..|.:|..::...||:|...::.|||.
Mouse   131 ATQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPK 195

  Fly   200 LLKPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKG 264
            |:...||||||:|.|.|::|:....::.|.|.|||||.....||.||||||:|||:|::|..|||
Mouse   196 LIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKG 260

  Fly   265 VIRSMICNGELKSEVIPVDIAINGLILLPYHNSLAEKRPLQIPVYNLTVDDAKKRTWKWIMDVGR 329
            .:||:.......::|||||..:|..|.:.::.  |..||....:|:.|..:.....|       .
Mouse   261 FLRSIKATPMAVADVIPVDTVVNLTIAVGWYT--AVHRPKSTLIYHSTSGNLNPCNW-------Y 316

  Fly   330 DLGI-------KYPFEVGLWYPDGNMTSSKFYHTICTILFMWLPAYLIDFLLLIFGQRRFMIRVQ 387
            .:|:       |.|||.....|:.:.|:|.|.......:...:||.:.||.|.:.|::..|:::.
Mouse   317 KMGLQVLATIEKIPFESAFRRPNADFTTSNFTTHYWNTVSHRVPAIIYDFYLRLTGRKPRMLKLM 381

  Fly   388 TKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSILGGRQYVM 452
            .::...:.:|::|...||::.:.:.|.:..||...|:|:|..:...::..||::..:||.::|::
Mouse   382 NRLLKTISMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLL 446

  Fly   453 KEPLTSLPKSRIQLRFMYVLDRICKT---MIISGLLYWVSQKLRVVDLF 498
            ||.|..:||::..||.:..:..:..|   :||..||...||..|.|..|
Mouse   447 KEDLAGIPKAKQHLRRLRNIHYLFNTALFLIIWRLLIARSQMARNVWFF 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 115/305 (38%)
Sterile 364..453 CDD:281068 22/88 (25%)
Far2NP_001334445.1 FAR-N_SDR_e 11..315 CDD:187547 115/305 (38%)
Sterile 357..447 CDD:397244 22/89 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847926
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3821
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.700

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