DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30427 and CG4020

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001259264.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster


Alignment Length:485 Identity:159/485 - (32%)
Similarity:269/485 - (55%) Gaps:11/485 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQRI 72
            :.|.::|:.||:||||||:||.|:||||.||..|..:.::.|||:|...|.||:..::..:::|:
  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67

  Fly    73 KDERPEMLKRVTIYQGDVTFDQLGLS-GESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLGT 136
            :.|:|....::....|||  :||||. |.:......|.|||:|.||:::.:..|..||.:|..||
  Fly    68 RREQPNARSKLVAIAGDV--EQLGLGIGSADLERLRNVNIVYHSAASVRFDDALSTAILLNTRGT 130

  Fly   137 RRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWMDVKTLDAITPDLL 201
            ...:.:|.|..:|:||:|:||.:.|.....:.|:||.........::|||..|.:.||.......
  Fly   131 HELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKYG 195

  Fly   202 KPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGVI 266
            ...|||||::|.|||.:|.::.:.:|:.|.|||||...:.||:|||.||.|||||:|:..|.|::
  Fly   196 NFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGIL 260

  Fly   267 RSMICNGELKSEVIPVDIAINGLILLPYH---NSLAEKRPLQIPVYNLTVDDAKKRTWKWIMDVG 328
            ||..|:..:.::.:|.||....||...|.   .|.:..:...:.|.|....:....|...::|:|
  Fly   261 RSQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRAKDSDLYVVNCATANISPITMGEVIDIG 325

  Fly   329 RDLGIKYPFEVGLWYPDGNMTSSKFYHTI--CTILFMWLPAYLIDFLLLIFGQRRFMIRVQTKIA 391
            :....|.|||..||.|.|.||:....|.:  ||:..  |.|.::|.||.::.::.|::::|.:|.
  Fly   326 KTFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHL--LMAIVVDTLLRLYNEKPFLMKLQRRIF 388

  Fly   392 VGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFK-INTDDVDDYEYMKVSILGGRQYVMKEP 455
            .....||.|....|.|::.:|..::..:.:.:...|. :...:::..|:.:..|.|.:::::||.
  Fly   389 AAFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRGAKEFLLKES 453

  Fly   456 LTSLPKSRIQLRFMYVLDRICKTMIISGLL 485
            ..|...:|.:::..||||.:|:.::.|.||
  Fly   454 PESSSAARFRVKIFYVLDFLCRGIVYSFLL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 111/309 (36%)
Sterile 364..453 CDD:281068 18/89 (20%)
CG4020NP_001259264.1 FAR-N_SDR_e 12..333 CDD:187547 115/322 (36%)
FAR_C 359..450 CDD:176924 18/92 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466741
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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