DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30427 and Far1

DIOPT Version :9

Sequence 1:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001011933.1 Gene:Far1 / 293173 RGDID:1306647 Length:515 Species:Rattus norvegicus


Alignment Length:524 Identity:174/524 - (33%)
Similarity:292/524 - (55%) Gaps:41/524 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQRI 72
            :.|||:.|.|.:|||:||:|||||||||.||..:..|.::.|.|.|:.|:.|:||:....:|.|:
  Rat     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRL 68

  Fly    73 KDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLGTR 137
            :||.|:..:::.....::|..:|.||.|..:.:.::||::||.|||::...|||||:.:|::.||
  Rat    69 RDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATR 133

  Fly   138 RALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWMDVKTLDAITPDLLK 202
            :.:.:|::||.||.|:|:|||:..|::..:.|.||..|..|:.|:...||||...::.|||.|:.
  Rat   134 QLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIG 198

  Fly   203 PHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGVIR 267
            ..||||.|:|.|||.:|:.....:.|.|.|||||..:..||.|||:||.|||:|:.|.||||::|
  Rat   199 DRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILR 263

  Fly   268 SMICNGELKSEVIPVDIAINGLILLPYHNSLAEKRPLQIPVYNLTVDDAKKRTWKWIMDVGRDLG 332
            :|..:....::::|||:.:|..:...:::.:  .||..|.|||.|........|..:.|.     
  Rat   264 TMRASNNALADLVPVDVVVNTSLAAAWYSGV--NRPRNIMVYNCTTGSTNPFHWGEVGDY----- 321

  Fly   333 IKYPFEVGLWYPDGNMTSSKFYHTIC------TILFMW------LPAYLIDFLLLIFGQRRFMIR 385
            :.:.|:.       |..:..|.|...      .:|..|      :||.|:|..|.:.||:.:|::
  Rat   322 LNHSFKT-------NPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMK 379

  Fly   386 VQTKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSILGGRQY 450
            ..|::...:..|::||:.||.:.:.:...:..:|...|::.|.|:...:...||::...:|.::|
  Rat   380 TITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKY 444

  Fly   451 VMKEPLTSLPKSRIQLRFMYVLDRICKTMIISGLLYW-----VSQKLR-----VVDL---FRSVF 502
            |:.|.::.||.:|..|..:..:.....|:::  :|.|     .||..|     ||.|   |.|.|
  Rat   445 VLNEEMSGLPAARKHLNKLRNIRYGFNTILV--ILIWRIFIARSQMARNIWYFVVSLCYKFLSYF 507

  Fly   503 HSST 506
            .:|:
  Rat   508 RASS 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 122/305 (40%)
Sterile 364..453 CDD:281068 24/94 (26%)
Far1NP_001011933.1 PLN02996 2..446 CDD:215538 155/455 (34%)
FAR-N_SDR_e 11..330 CDD:187547 125/332 (38%)
Sterile 371..447 CDD:281068 18/75 (24%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507 15/57 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351486
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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