DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pain and wtrw

DIOPT Version :9

Sequence 1:NP_611979.1 Gene:pain / 37985 FlyBaseID:FBgn0060296 Length:913 Species:Drosophila melanogaster
Sequence 2:NP_731193.1 Gene:wtrw / 40931 FlyBaseID:FBgn0260005 Length:986 Species:Drosophila melanogaster


Alignment Length:1036 Identity:214/1036 - (20%)
Similarity:373/1036 - (36%) Gaps:327/1036 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DFNNCG--------------FIDPQAQLAGALAKQDIRQFVAALD-----SGALADLQDDRHTSI 47
            ::..||              |.:|.::|:..:....:|  ::.:|     :|.:...:|...:::
  Fly    71 EYMECGPSPPAESAPSMYDSFEEPTSELSVQICNDTLR--ISLIDQMKSAAGRVKLFEDIEQSNV 133

  Fly    48 YEKALSTPG----------CR---------DFIEACIDHGSQVNYINKKLDKAAISYAADSRDPG 93
            ..:.:.|..          |.         |.||:.::.|:.:::    .|:..||....|...|
  Fly   134 VAEGIRTHFESASKLEKNLCYLWAAYLKRWDLIESLLEAGADLHF----CDQNGISALHLSAFSG 194

  Fly    94 NLAAL-LKYRPGNKVQVDRKYGQLTPLNSLAKNLTDENAPDVYSCMQLLLDYGA-------SPNI 150
            .||.| |....|..|.:..|.  .|||:..|.....|.|       :||::.||       .||.
  Fly   195 CLATLGLLVAKGLNVNLQSKC--YTPLHCAAFGNAAEAA-------KLLINNGADISKDTSKPNC 250

  Fly   151 VDQGEFTPLHHVLRKSKVKAGKKELIQLFLDHPELDIDSYR-NGEVRRLLQAQFPELKLPEERHT 214
                |.:.||..:|.:.:     |.:|:|:.. ..|::|.: ||.....|.|....::..|....
  Fly   251 ----EESLLHCAVRSNAL-----ECLQIFIAE-GADVNSLKPNGTNAIHLAADLGNIQCLEALLN 305

  Fly   215 GPEIDIQTLQRTLRDGDETLFEQQFAEYLQNLKGGADNQLNAHQEEYFGLLQESIKRGRQRAFDV 279
            .|..| ..::..:|:.:.|                              .|..:...|.....|:
  Fly   306 APNAD-ANVRICIREKEST------------------------------ALHLAADEGNVECVDL 339

  Fly   280 ILSTGMDI---NSR-------PGRANEANLVETAVIYGNWQALERLLKEPNLRLTPDSKLLNAVI 334
            :|:.|.|.   |.|       ..|.:..:.||:.:..||..|    ..|.....||    |:|.:
  Fly   340 LLAKGADAKLKNHRGFTPLHLAARTSSLDCVESLLRNGNADA----NAEDFDHRTP----LHAAV 396

  Fly   335 GRLDEPPYDGSSHQRCFELLINSDRVDINEADSGRLVPLFFAVKYRNTSAMQKLLKNGAYIGSKS 399
            |: .|..||      ..|.||... .::|..|......|..|........::.|:.:||.:.:||
  Fly   397 GK-SENAYD------IMETLIQWG-ANVNHKDIYGFTALHLAALDGLVQCVEMLIFHGADVTTKS 453

  Fly   400 AFGTLPI----KDMPPEV--LEEHFDSCITT-NGERPGDQNFEIIIDYKNLMRQ---ERDSGLNQ 454
            ..||..:    :..|..|  :.:..|:.||. :.:.|.::..|:.:|::.|::.   ...|.||.
  Fly   454 KKGTSALNVITRKTPASVAMIRQKLDAAITLHHSQDPVNREVELELDFRQLLQHCHPREISYLNT 518

  Fly   455 LQDEMAPIAFIAESKEMRHLLQHPLISSFLFLKWHRL------SVIFYLNFLIY-SLFTASIITY 512
            ..||           ..:.:|:|||.||||::||.::      .:||..:|::: :|:..:.:.:
  Fly   519 FVDE-----------GQKEILEHPLCSSFLYIKWGKIRKYYIGRLIFCFSFVLFLTLYVLTALAH 572

  Fly   513 TLLKFHESDQRALTA------------------FFGLLSWLGISYLILRECIQWIMSPV------ 553
            ......::|...:.|                  |...:.|             |::..:      
  Fly   573 NCYNGSKNDNTTIPAQELCQKQSILGDMLRNNPFVMEMQW-------------WVLVAITIVEIF 624

  Fly   554 -------------RYFWSITNIMEVALITLSIFTCMESSFDKET---QRVLAVFTILLVSMEFCL 602
                         .|...:.||||..:|| |:|. :...:..:|   |..:..|.:||......|
  Fly   625 RKLYGITGYSSFRHYVTQVENIMEWFVIT-SVFV-ISYIYTNKTYTFQNHIGAFAVLLGWTNLML 687

  Fly   603 LVGSLPVLSISTHMLMLREVSNSFLKSFTLYSIFVLTFSLCFYILFGKSVEEDQSKSATPCPPLG 667
            ::|.|||..:  ::.|...|...|.|.|..||..::.|::.|.::|..|                
  Fly   688 MIGQLPVFDV--YVAMYTRVQGEFAKLFMAYSCMLIGFTISFCVIFPSS---------------- 734

  Fly   668 KKEGKDEEQGFNTFTKPIEAVIKTIVMLTGEFDAGSI----------QFTSIYTYLIFLLFVIFM 722
                       ::|..|....|..:||:.||.|...:          ....:...:.|:||::|:
  Fly   735 -----------SSFANPFMGFITVLVMMIGEQDLSLLINDPEGKDPPFLLEVSAQITFVLFLLFV 788

  Fly   723 TIVLFNLLNGLAVSDTQVIKAQAELNGAICRTNVLSRYEQVLTGHGRAGFL---LGNHLFRS--- 781
            ||:|.|||.|:||.|.|.:|..|.|:..:.:|.::|..|..|..    |:|   |.|.|..:   
  Fly   789 TIILMNLLVGIAVHDIQGLKKTAGLSKLVRQTKLISYIESALFN----GYLPTWLRNLLHYTALV 849

  Fly   782 --------ICQR-------------LMNIY-------------------PNYLSLRQISVLPNDG 806
                    :|.:             ||..|                   .||||.:. ....|:|
  Fly   850 SPQAYRVVLCVKPLNPSEKRLPREILMKAYEVGKMRKHFGHTISSKNSAENYLSYKN-KYNNNNG 913

  Fly   807 --NKVLIPMSDP-----------------------FEMRTLKKASFQQLPLSAAVPQKKLL 842
              ...::|.|||                       .|::.||:|...|...::.|..|.|:
  Fly   914 ATTGYVLPDSDPDAGQFTTLTTKIDDNADRIEFLTQEIQELKQALISQQQQASKVIDKLLI 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
painNP_611979.1 ANK 56..180 CDD:238125 35/150 (23%)
ANK repeat 82..111 CDD:293786 10/29 (34%)
ANK repeat 113..152 CDD:293786 12/45 (27%)
ANK 303..406 CDD:238125 26/102 (25%)
Ank_2 303..398 CDD:289560 22/94 (23%)
ANK repeat 324..366 CDD:293786 12/41 (29%)
ANK repeat 368..393 CDD:293786 3/24 (13%)
Ion_trans 525..746 CDD:278921 58/270 (21%)
wtrwNP_731193.1 Ank_2 156..241 CDD:289560 26/97 (27%)
ANK repeat 182..213 CDD:293786 10/30 (33%)
ANK repeat 215..242 CDD:293786 10/35 (29%)
ANK 216..341 CDD:238125 33/172 (19%)
ANK repeat 250..281 CDD:293786 9/40 (23%)
Ank_2 255..351 CDD:289560 23/132 (17%)
ANK repeat 283..317 CDD:293786 7/34 (21%)
ANK 323..443 CDD:238125 31/165 (19%)
ANK repeat 323..351 CDD:293786 7/57 (12%)
Ank_2 325..420 CDD:289560 27/110 (25%)
ANK repeat 353..385 CDD:293786 7/35 (20%)
ANK repeat 387..420 CDD:293786 12/44 (27%)
Ank_2 392..>460 CDD:289560 20/75 (27%)
ANK repeat 422..452 CDD:293786 5/29 (17%)
Ion_trans 613..812 CDD:278921 55/229 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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