DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpc2 and AT5G48970

DIOPT Version :9

Sequence 1:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_199708.1 Gene:AT5G48970 / 834956 AraportID:AT5G48970 Length:339 Species:Arabidopsis thaliana


Alignment Length:320 Identity:103/320 - (32%)
Similarity:165/320 - (51%) Gaps:39/320 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LMQAVGGGIAGAATRTITQPLDVLKIRFQMQVEPVT-------NHKG-SKYRGVIHAFKSVYAEE 66
            |:.|..|.|:|..:|::|.||||:|||||:|:||.|       |..| |||.|::.|.|.::.||
plant    19 LIDASAGAISGGVSRSVTSPLDVIKIRFQVQLEPTTSWGLVRGNLSGASKYTGMVQATKDIFREE 83

  Fly    67 GMRGMFRGHNSGQVLSISYALVQFWSYEQLRSMA----HQFDYWRERPFLMFFICGGIAGCLGAV 127
            |.||.:||:....::.:.|..:||....:|:|.|    ...|:....|:|. |:.|.:|||...:
plant    84 GFRGFWRGNVPALLMVMPYTSIQFTVLHKLKSFASGSTKTEDHIHLSPYLS-FVSGALAGCAATL 147

  Fly   128 AAQPFDVVRTQMVA-ADPSSRRSQMNTFTGLRKVYKMEGWMGLSRGLPFTLVQVFPLVGANF--- 188
            .:.|||::||.:.: .:|....:..:.|.   .:.:..|..||..||..|||::.|..|..|   
plant   148 GSYPFDLLRTILASQGEPKVYPTMRSAFV---DIIQSRGIRGLYNGLTPTLVEIVPYAGLQFGTY 209

  Fly   189 -LFYKYL---NAAVLMAKPPDQRQEIHGAF-LFLNGALSGVLAKMIVYPADLLKKRIQLMAFKQ- 247
             :|.:::   |...|.:|.|........:| ||:.|..:|..||::.:|.|::|||.|:...:: 
plant   210 DMFKRWMMDWNRYKLSSKIPINVDTNLSSFQLFICGLGAGTSAKLVCHPLDVVKKRFQIEGLQRH 274

  Fly   248 -------ERKTFGRNPECPTILGCITTTFREEGIGGFYKGMLPTLLKAGLMSAVYFSIYD 300
                   ||:.: ||     :|..:......||..|.|||::|:.:||....||.|..|:
plant   275 PRYGARVERRAY-RN-----MLDGLRQIMISEGWHGLYKGIVPSTVKAAPAGAVTFVAYE 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc2NP_001246511.1 PTZ00169 23..304 CDD:240302 98/307 (32%)
Mito_carr 23..99 CDD:278578 34/83 (41%)
Mito_carr 108..194 CDD:278578 26/90 (29%)
Mito_carr 216..307 CDD:278578 29/93 (31%)
AT5G48970NP_199708.1 Mito_carr 18..116 CDD:395101 39/96 (41%)
Mito_carr 128..218 CDD:395101 26/93 (28%)
Mito_carr 236..334 CDD:395101 31/99 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I3085
eggNOG 1 0.900 - - E1_KOG0752
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I1450
OMA 1 1.010 - - QHG55227
OrthoDB 1 1.010 - - D1454699at2759
OrthoFinder 1 1.000 - - FOG0001923
OrthoInspector 1 1.000 - - mtm1203
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24089
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2188
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.940

Return to query results.
Submit another query.