DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc2 and Tpc1

DIOPT Version :9

Sequence 1:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster


Alignment Length:311 Identity:132/311 - (42%)
Similarity:189/311 - (60%) Gaps:12/311 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ENSVVVQLMQAVGGGIAGAATRTITQPLDVLKIRFQMQVEPVTNHKG--------SKYRGVIHAF 59
            ::|...||.|.:.||::.|.||:..|||||||||||:||||:..:..        |||..:..|.
  Fly    22 KHSTREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAV 86

  Fly    60 KSVYAEEGMRGMFRGHNSGQVLSISYALVQFWSYEQLRSMAHQFDYWRERPFLMFFICGGIAGCL 124
            |::|.||||...::|||..|||||.|.:.|||:||||..||.|..|..:...|..|:||..||..
  Fly    87 KTIYREEGMLAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHLSNFLCGAAAGGA 151

  Fly   125 GAVAAQPFDVVRTQMVAADPSSRRSQMNTFTGLRKVYKMEGWMGLSRGLPFTLVQVFPLVGANFL 189
            ..:.:.|.||:||:::|.|.|  :...|....:..:.:.||..|:.|||...|:|:.||:|.||:
  Fly   152 AVIISTPLDVIRTRLIAQDTS--KGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFM 214

  Fly   190 FYK-YLNAAVLMAKPPDQRQEIHGAFLFLNGALSGVLAKMIVYPADLLKKRIQLMAFKQERKTFG 253
            .|: :.:.|....:..|:.|......|.| ||.||:|:|.||||.||:|||:|:..|:..|:|||
  Fly   215 AYRLFSDWACAFLEVSDRSQLPTWTLLGL-GASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFG 278

  Fly   254 RNPECPTILGCITTTFREEGIGGFYKGMLPTLLKAGLMSAVYFSIYDMFKR 304
            :..:|..:..|:..|.|:||:.|.|||:.|||||:.:.:|:||||||..|:
  Fly   279 QTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYDKLKQ 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc2NP_001246511.1 PTZ00169 23..304 CDD:240302 124/289 (43%)
Mito_carr 23..99 CDD:278578 43/83 (52%)
Mito_carr 108..194 CDD:278578 29/86 (34%)
Mito_carr 216..307 CDD:278578 45/89 (51%)
Tpc1NP_650034.1 Mito_carr 29..123 CDD:278578 46/93 (49%)
PTZ00169 33..329 CDD:240302 127/298 (43%)
Mito_carr 153..222 CDD:278578 23/70 (33%)
Mito_carr 233..328 CDD:278578 46/95 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440847
Domainoid 1 1.000 77 1.000 Domainoid score I3085
eggNOG 1 0.900 - - E1_KOG0752
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I1450
Isobase 1 0.950 - 0 Normalized mean entropy S1857
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D106711at6656
OrthoFinder 1 1.000 - - FOG0001923
OrthoInspector 1 1.000 - - otm24543
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24089
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2188
1110.850

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