DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpc2 and Tyler

DIOPT Version :10

Sequence 1:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster


Alignment Length:411 Identity:82/411 - (19%)
Similarity:152/411 - (36%) Gaps:116/411 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LMQAVGGGIAGAATRTITQPLDVLKIRFQMQ----VEPVTN------HKG--------------- 49
            :.|.|...:.|..|..:..||:|:|.|.|.|    ..|..:      |.|               
  Fly    46 MQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDICVPK 110

  Fly    50 --------SKYRGVIHAFKSVYAEEGMRGMFRGHNSGQVLSISYALVQFWSYEQLR-SMAHQF-- 103
                    ...||.:.||..:....|..|::.|.:...|.::...::.|.:||.:: |::|.:  
  Fly   111 PGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKNSLSHIYLV 175

  Fly   104 -DYWRER-----------------------------------PFLMFFICGGIAGCLGAVAAQPF 132
             ..:.|.                                   |:.:....|..:..:...|..|.
  Fly   176 SQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICSRTIVVTAITPI 240

  Fly   133 DVVRTQMVAADPSSRRSQMNTFTG----LRKVYKMEGWMGLSRGLPFTLVQVFPLVGANFLFYKY 193
            ::||.:|        :|:..|:..    ||.:.:..|.:||.||.|.|:::..|..|..:..|:.
  Fly   241 EMVRIKM--------QSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYEA 297

  Fly   194 LNAAVLMAKPPDQRQEIHGAFLFLNGALSGVLAKMIVYPADLLKKRIQL-----MAFKQERKTFG 253
            :..|..:.:|.       ..|.||.||:||.:|..:..|.||:....|:     :.:::.....|
  Fly   298 IKRAFSVTEPT-------FLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTG 355

  Fly   254 -----------RNPEC------PTILGCITTTFREEGIGGFYKGMLPTLLKAGLMSAVYFSIYDM 301
                       :.|:.      |::|..:...:|.:|:.|.|.|::|.:|:.....|:..|.::.
  Fly   356 AGTGTGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEY 420

  Fly   302 FKR---HYIAPMKEAEKNRQK 319
            .|.   ||...::||...|.:
  Fly   421 SKSFFFHYNLDLQEAAYRRSQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc2NP_001246511.1 Mito_carr 23..99 CDD:395101 22/109 (20%)
Mito_carr 108..194 CDD:395101 22/124 (18%)
Mito_carr 216..307 CDD:395101 26/115 (23%)
TylerNP_608327.2 Mito_carr 41..171 CDD:395101 26/124 (21%)
Mito_carr 216..303 CDD:395101 22/94 (23%)
Mito_carr 306..429 CDD:395101 28/129 (22%)

Return to query results.
Submit another query.