DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc2 and MME1

DIOPT Version :9

Sequence 1:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster


Alignment Length:294 Identity:76/294 - (25%)
Similarity:127/294 - (43%) Gaps:31/294 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VGGGIAGAATRTITQPLDVLKIRFQMQVEPVTNHKGSKYRGVIHAFKSVYAEEGMRGMFRGHNSG 78
            :.||:.|.....:..|||.:|:|.|....|... :..:|:|||......:..||.||.:||.::.
  Fly    19 IAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPG-QPPRYKGVIDCAARTFRYEGFRGFYRGISAP 82

  Fly    79 QVLSISYALVQFWSYEQLRSMAHQFDYWRERPFLMFFICGGIAGCLGAVAAQPFD----VVRTQM 139
            .|.......|.|..|...:.:....|:.| ..:...|..|.:||...|:...|.|    :::||.
  Fly    83 LVGVTPIYAVDFAVYAAGKRLFQTDDHIR-LTYPQIFAAGALAGVCSALVTVPTDRIKVLLQTQT 146

  Fly   140 VAADPSSRRSQMNTFTGLRKVYKMEGWMGLSRGLPFTLVQVFPLVGANFLFYKYLNAAVLMAKPP 204
            |:..|......::|   ..|:|:..|...|.:|....:::..| .|..|:.|::|..   :|:..
  Fly   147 VSNGPLLYNGTIDT---AAKLYRQGGIRSLFKGTCACILRDSP-TGFYFVTYEFLQE---LARKK 204

  Fly   205 DQRQEIHGAFLFLNGALSGVLAKMIVYPADLLKKRIQLMAFKQERKTFGRNPECPTILGCITTTF 269
            ....:|......|:|..:|::...:..|.|:||.|:|            ..|| .|....|.:.|
  Fly   205 SANGKISTTSTILSGGTAGIVFWTLAVPFDVLKSRLQ------------SAPE-GTYKHGIRSVF 256

  Fly   270 RE----EGIGGFYKGMLPTLLKA-GLMSAVYFSI 298
            |.    ||....::|:||.||:| ...:||:|.:
  Fly   257 RNLMATEGPKALFRGILPILLRAFPSTAAVFFGV 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc2NP_001246511.1 PTZ00169 23..304 CDD:240302 73/285 (26%)
Mito_carr 23..99 CDD:278578 21/75 (28%)
Mito_carr 108..194 CDD:278578 21/89 (24%)
Mito_carr 216..307 CDD:278578 26/88 (30%)
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 24/88 (27%)
Mito_carr 111..205 CDD:278578 24/101 (24%)
Mito_carr 208..297 CDD:278578 27/96 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441565
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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