DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and TPC1

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_567258.1 Gene:TPC1 / 825655 AraportID:AT4G03560 Length:733 Species:Arabidopsis thaliana


Alignment Length:672 Identity:136/672 - (20%)
Similarity:242/672 - (36%) Gaps:209/672 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1810 SKYFTSF------WTILDFIIVFVSVFS--LLIEENEN--------------------LKVLRSL 1846
            ::|:..|      |::..|.::|::.|.  |..|:|..                    ..::..:
plant    61 ARYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPYLTNAESIIYEV 125

  Fly  1847 RTLRALR-----PLRAISRWQGMRIVVNALMYAIPSIFNVLLV--CLVFWLIFSIMGVQFFGGKF 1904
            .||..|.     |:    .::|.||...:.:..:.....|:|.  .||.:|..|.:...|...:.
plant   126 ITLAILLVHTFFPI----SYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRI 186

  Fly  1905 FKCVNEMGELLPITEVNDKWDCIEQNY-TWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVD 1968
            ...|..:..:|.|.|:.|....:.... |::|.      :.:..|.||    |..|:..:.....
plant   187 APYVRVIIFILSIRELRDTLVLLSGMLGTYLNI------LALWMLFLL----FASWIAFVMFEDT 241

  Fly  1969 ARGVDLQPQREANLY-----------------AY-------IYFVIFIVCGSFFTLNLFIGVIID 2009
            .:|:.:.....|.||                 ||       ::||::::.|.:|..||.:.|:.|
plant   242 QQGLTVFTSYGATLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYD 306

  Fly  2010 NFNMLKKKYEGGVLEM---------FLTESQKH----------------YYTAMKKLGRKKPQKV 2049
            :|.....|...|:.:|         .|.:|.|:                .|..:.|:.:::    
plant   307 SFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEE---- 367

  Fly  2050 IKRPINHFLAMFYDLSNSRRFEI----------AIFVLIFLNMLTMGIEHYDQ------------ 2092
                   |..:|.:|.::|.|:|          ||.:......:....||:.|            
plant   368 -------FGLIFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRA 425

  Fly  2093 -------PHAVFFIL------------------------EVSNAFFTTVFGLEAIVKIVGLRYHY 2126
                   .:|:.|||                        :|:...|..::.||..:||    |.|
plant   426 FVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKI----YTY 486

  Fly  2127 -FTVPW----NVFDFLLVLASIFGILMEDIMIDLPISPTL------LRVVRVFRIGRILRLIKAA 2180
             |...|    |.||||:....:.|   |......|...|.      :|.:.:.|:.|::||:...
plant   487 GFENYWREGANRFDFLVTWVIVIG---ETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNV 548

  Fly  2181 KGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF------GNVKL---QGALDD--MVNF 2234
            :..|..:...:..:|:|......:..:..||..:|:.:|      ||.||   :.|.||  :.||
plant   549 QRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNF 613

  Fly  2235 QTFGRSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGNCGHPLLAITYFTSFIIISYMI 2299
            ..:...|..||.|:....|...:||            :....|.    ..:||||.||.:|:.::
plant   614 NDYPNGMVTLFNLLVMGNWQVWMES------------YKDLTGT----WWSITYFVSFYVITILL 662

  Fly  2300 VINMYIAIILEN-FNQAHQEEE 2320
            ::|:.:|.:||. |.:...|||
plant   663 LLNLVVAFVLEAFFTELDLEEE 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 51/268 (19%)
Na_channel_gate 2009..2063 CDD:240441 12/78 (15%)
Ion_trans 2085..2320 CDD:278921 68/300 (23%)
GPHH 2331..2386 CDD:293510
TPC1NP_567258.1 Ion_trans 124..311 CDD:278921 41/200 (21%)
EFh 326..391 CDD:238008 11/75 (15%)
EF-hand_7 327..392 CDD:290234 11/75 (15%)
Ion_trans 456..675 CDD:278921 59/241 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 73 1.000 Domainoid score I3264
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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