Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_110502.2 | Gene: | Scn1a / 81574 | RGDID: | 69364 | Length: | 2009 | Species: | Rattus norvegicus |
Alignment Length: | 2555 | Identity: | 813/2555 - (31%) |
---|---|---|---|
Similarity: | 1171/2555 - (45%) | Gaps: | 798/2555 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 PRTKASVEDGDVLPRKFEPFPEHMYGKPLEEIDT-FIYEETFCVVSKRFRKNYIHRFTGTKSLFL 108
Fly 109 FYPWSPARRVCVYIATNQFFDYCVMATILFNCIFLAMT---ETVEEAEYIFLAIYSIEMVIKIIA 170
Fly 171 KGFLLNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINAL 235
Fly 236 LHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQVPTDWTNVSHT-------------- 286
Fly 287 -------DWQIWVNDTDNWLYDEDEL-PVLCGNLTGARHCPFEYVCLCVGENPNHGYTNFDNFMW 343
Fly 344 SMLTTFQLITLDYWENVYNMVLATCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNE 408
Fly 409 ERKK---------DLLDHRDD----------STFSFDPSVLNVKKLNKNNKKKIDSRKGVLLASY 454
Fly 455 SKKKTRRKKTKGGKEGGTNGNGNGSNGDDNKSHSAT-------------------------PSPG 494
Fly 495 P----------SPRHSATERPSALTMQAQ-----KQYQQMEQQHKLAKSGSGGSNNPMAPTPKGR 544
Fly 545 ISFQDSGMGVKNPNMLYPSDYKGQL---------IANSGQPSSNSSGVNR--------ESSQDDS 592
Fly 593 GVVDDHEEQDTTNDMGHVSTVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLP 657
Fly 658 DRNCDRCVH--------W-CTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMS 713
Fly 714 ESFRNALDVGNKVFTSIFTFECIVKLMALSK-DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVL 777
Fly 778 RGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTP--EKF 840
Fly 841 DPD-PVPRWNFNDFFHSFMMIFRILCGEWIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLN 904
Fly 905 LFLALLLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDA 969
Fly 970 QQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGL 1034
Fly 1035 EYDDTGDLPEQIQLQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQ 1099
Fly 1100 HQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGS 1164
Fly 1165 EEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDE 1229
Fly 1230 LLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSE 1294
Fly 1295 FDNI-IQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVL 1358
Fly 1359 PLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVA 1423
Fly 1424 MEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKM 1488
Fly 1489 PRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSL 1553
Fly 1554 KTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSAR 1618
Fly 1619 TESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRN 1683
Fly 1684 SQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSC---MDTQSAKHWTRVRTAVL 1745
Fly 1746 TVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFS 1810
Fly 1811 KYFTSFWTILDFIIVFVSVFSLLIEE--NENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMY 1873
Fly 1874 AIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVN-EMGELLPITEVNDKWDC---IEQNYT-- 1932
Fly 1933 WINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSF 1997
Fly 1998 FTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLAMFY 2062
Fly 2063 DLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHYF 2127
Fly 2128 TVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVV 2192
Fly 2193 SLPALFNIGALLGLITFIYAILGMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVL 2257
Fly 2258 ESLM-IQPPDCDPFIHGHTN------GNCGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQA 2315
Fly 2316 HQEEEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPIS 2380
Fly 2381 KGNKIHCLDILHALVKHVLGHVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAA 2445
Fly 2446 KTIQTGWKEYLRRKREKERS 2465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 114/240 (48%) |
Ion_trans | 705..902 | CDD:278921 | 106/200 (53%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 158/258 (61%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 32/53 (60%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 125/241 (52%) | ||
GPHH | 2331..2386 | CDD:293510 | 25/54 (46%) | ||
Scn1a | NP_110502.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 28..60 | 3/10 (30%) | |
I. /evidence=ECO:0000305 | 110..454 | 151/343 (44%) | |||
Ion_trans | 127..433 | CDD:395416 | 143/305 (47%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 458..528 | 17/81 (21%) | |||
Na_trans_cytopl | 510..718 | CDD:403218 | 33/219 (15%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 584..628 | 3/43 (7%) | |||
II. /evidence=ECO:0000305 | 750..1022 | 141/277 (51%) | |||
Ion_trans | 767..980 | CDD:395416 | 117/215 (54%) | ||
Na_trans_assoc | 1006..1213 | CDD:399489 | 68/824 (8%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1129..1163 | 11/173 (6%) | |||
III. /evidence=ECO:0000305 | 1200..1514 | 179/315 (57%) | |||
Ion_trans | 1217..1492 | CDD:395416 | 162/274 (59%) | ||
Na_channel_gate | 1484..1536 | CDD:240441 | 32/53 (60%) | ||
IV. /evidence=ECO:0000305 | 1523..1821 | 153/300 (51%) | |||
Ion_trans | 1540..1796 | CDD:395416 | 133/258 (52%) | ||
S1-S2 loop of repeat IV. /evidence=ECO:0000250|UniProtKB:A2APX8 | 1561..1571 | 4/9 (44%) | |||
S3b-S4 loop of repeat IV. /evidence=ECO:0000250|UniProtKB:A2APX8 | 1619..1636 | 4/16 (25%) | |||
GPHH | 1808..1855 | CDD:407139 | 22/46 (48%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1986..2009 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |