DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and Cacna1h

DIOPT Version :10

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_006524796.1 Gene:Cacna1h / 58226 MGIID:1928842 Length:2367 Species:Mus musculus


Alignment Length:3016 Identity:641/3016 - (21%)
Similarity:1039/3016 - (34%) Gaps:1122/3016 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEAE--------------YIFLAIYSIEMVI 166
            |..|:.:..|.:|::..|..|:.||:.|.|....|:.|              :|| |.:::||||
Mouse    90 RSWCLRLVCNPWFEHISMLVIMLNCVTLGMFRPCEDVECRSERCSILEAFDDFIF-AFFAVEMVI 153

  Fly   167 KIIAKGFLLNKYTYLRNPWNWLDFVVITSG---YATIGMEVGNLAGLRTFRVLRALKTVSIMPGL 228
            |::|.| |..:..||.:.||.|||.::.:|   |:..|..| :|:.:||.||||.|:.::.:|.:
Mouse   154 KMVALG-LFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNV-SLSAIRTVRVLRPLRAINRVPSM 216

  Fly   229 KTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKC------VRQ------VPTDWT 281
            :.::..||.:...|..|:.|..|...:|.:..:|::.|.|||:|      ||.      .|...|
Mouse   217 RILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSAFVRNNNLTFLRPYYQT 281

  Fly   282 NVSHTDWQIWVNDTDNWLY------DEDELPVLC--------------GNLTGARHC----PFEY 322
            .....:..|..:..||.:.      ...||.|.|              |. .|...|    .:..
Mouse   282 EEGEENPFICSSRRDNGMQKCSHIPSRRELRVQCTLGWEAYGQPQAEDGG-AGRNACINWNQYYN 345

  Fly   323 VCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSVSFFTVVVFFGSFYL 387
            ||.....||::|..||||..::.:..||:|||:.|.::...|:......:..:|.:::..|||::
Mouse   346 VCRSGEFNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFM 410

  Fly   388 INLMLAVVALSYEE----EAEITNEERKKDLLDHRDDSTF-SFDPSVLNVKKLNK---NNKKKID 444
            |||.|.|:|..:.|    |.::..|:|.:.|   .:|||. ||.......::|.|   :..:|:.
Mouse   411 INLCLVVIATQFSETKQRENQLMREQRARYL---SNDSTLASFSEPGSCYEELLKYVGHIFRKVK 472

  Fly   445 SRKGVLLASYS---KKKT-----------RRKKTKGGKE------------------------GG 471
            .|...|.|.:.   :||.           ||:..:.|:.                        |.
Mouse   473 RRSLRLYARWQSRWRKKVDPSSTLHGQGPRRRPRRAGRRTASVHHLVYHHHHHHHHHYHFSHGGP 537

  Fly   472 TNGNGNGSNGDDNKSHSATPSPGPSPRHSATERPSALTM-----QAQKQYQQMEQQHKLA----- 526
            ...:.....||.....:..|...|||.|...:..|..::     ..:...::....|.:|     
Mouse   538 RRPSPEPGAGDTRLVRACVPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVAHTIATAASL 602

  Fly   527 --KSGSGGSNNP-MAPT------------PKGRISFQDSGMGVKNPNML-YPSDY-KGQLIANS- 573
              .||.|..|.| :.|:            |||..|....|....:|..| .||.| |.|.:... 
Mouse   603 KLASGLGTMNYPTILPSGAVNSKGSTSSRPKGLRSAGTPGATAHSPLSLGSPSPYEKIQHVVGEQ 667

  Fly   574 --GQPSSNSSGVN-------------------------------RESSQDDSGVVDDHEEQDTTN 605
              |:.||:.||::                               .|.|..:||..|.|...:.|.
Mouse   668 GLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFEFSGSESGDSDAHGVYEFTQ 732

  Fly   606 DMGHVSTVELALSPRE--------------VRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDL 656
            |:.|....:....|.|              :|.....|.:.|:                      
Mouse   733 DVRHGDCRDPVQQPHEGGTPGHGNERWRPPLRTASQPGGLGRL---------------------- 775

  Fly   657 PDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALD 721
                             |..|.:.|.::|....|...|...|::||..:.:|:|...:...|||:
Mouse   776 -----------------WASFSSKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALE 823

  Fly   722 VGNKVFTSIFTFECIVKLMALSKDFFLCG--------WNIFDLLIVTASLLDIIFELVDGLSVLR 778
            :.|.||||:|..|.::||:|       ||        :||||.::|..|:.:|:.:...||||||
Mouse   824 ISNIVFTSMFALEMLLKLLA-------CGPLGYIRNPYNIFDGIVVIISVWEIVGQADGGLSVLR 881

  Fly   779 GLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPD 843
            ..||||||||.:....::..|.:::.|:..:....::|::.|:||:::||.||...::.:....|
Mouse   882 TFRLLRVLKLVRFLPALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGD 946

  Fly   844 PVP-RWNFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLF 906
            .|| |.||:....:.:.:|:||..| |...|::.|.:.....|    ..|:..:..||:::.||.
Mouse   947 TVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAA----LYFVALMTFGNYVLFNLL 1007

  Fly   907 LALLLNSFNSE--ELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDA 969
            :|:|:..|.:|  ..:|..:|....:.|....:::||:                           
Mouse  1008 VAILVEGFQAEGDATRSDTDEDKTSTHLEEDFDKLRDV--------------------------- 1045

  Fly   970 QQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGL 1034
                      ||             .|.|.:.|:                          :....
Mouse  1046 ----------QA-------------TEMKMYSLA--------------------------VTPNG 1061

  Fly  1035 EYDDTGDLPEQI--QLQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERR 1097
            ..:..|.||..:  ...|.|:|                                  ||.......
Mouse  1062 HLEGRGSLPPPLITHTAATPMP----------------------------------TPKSSPHLD 1092

  Fly  1098 LQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRY 1162
            :.|.:        .|||..             :|...||...||:|..       ||:.:....:
Mouse  1093 MAHTL--------LDSRRS-------------SSGSVDPQLGDQKSLA-------SLRSSPCAPW 1129

  Fly  1163 GSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQ 1227
            |                             ..|:|.|:||                |.||:    
Mouse  1130 G-----------------------------PNSAGSSRRS----------------SWNSL---- 1145

  Fly  1228 DELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEH 1292
                                                          .|.||              
Mouse  1146 ----------------------------------------------GRAPS-------------- 1150

  Fly  1293 SEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVV 1357
                            :||.:...||:                      ::::|..:.|..||. 
Mouse  1151 ----------------LKRRSQCGERE----------------------SLLSGEGKGSTDDEA- 1176

  Fly  1358 LPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFV 1422
                                                        ||                   
Mouse  1177 --------------------------------------------ED------------------- 1178

  Fly  1423 AMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEK 1487
                    :...|...|..||..|                               .:.||     
Mouse  1179 --------SRPNSGTHPGASPGPR-------------------------------ATPLR----- 1199

  Fly  1488 MPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPAT-PPTSLKSSIEPPTLAQIS 1551
                        |.:||..:||              |...|..||| .||.              
Mouse  1200 ------------RAESLGHRST--------------MDLCPPRPATLLPTK-------------- 1224

  Fly  1552 SLKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQS 1616
                             |...:.|....|:...                                
Mouse  1225 -----------------FRDCNGQMVALPSEFF-------------------------------- 1240

  Fly  1617 ARTESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGR 1681
            .|.:||...||:                                           :.||:     
Mouse  1241 LRIDSHKEDAAE-------------------------------------------FDDDI----- 1257

  Fly  1682 RNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLT 1746
                   .|...|      :..||.:...||.|..    |..|.:.....|:     |:|.:...
Mouse  1258 -------EDSCCF------RLHKVLEPYAPQWCSS----RESWALYLFPPQN-----RLRVSCQK 1300

  Fly  1747 VVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGF-- 1809
            |:....|:..|||.||.:.||:..|..::|...|.:..|...|:.|..||||||::|.:|||.  
Mouse  1301 VIAHKMFDHVVLVFIFLNCITIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLW 1365

  Fly  1810 --SKYFTSFWTILDFIIVFVSVFSLLIE-----ENENLKVLRSLRTLRALRPLRAISRWQGMRIV 1867
              ..|..|.|.:||.::|.||:..:::.     ..:.|.|||.||.||.|||||.|||..|:::|
Mouse  1366 GEHAYLQSSWNVLDGLLVLVSLVDIIVAVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLV 1430

  Fly  1868 VNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNYT 1932
            |..|:.::..|.|::|:|..|::||.|:|||.|.|||:.|     |......:..|.:|...:|.
Mouse  1431 VETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYC-----EGTDTRNITTKAECHAAHYR 1490

  Fly  1933 WINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSF 1997
            |:..|..||::|...::|..:::.:||:.:|.|.:||.|:|.||.:..|.:..:||:.|::..||
Mouse  1491 WVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSF 1555

  Fly  1998 FTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVI-------KRP-- 2053
            |.||:|:||:::||:..::..|.       .|:::.....:::|.|::..|.:       :||  
Mouse  1556 FVLNMFVGVVVENFHKCRQHQEA-------EEARRREEKRLRRLERRRRSKAVPEVEEAQRRPYY 1613

  Fly  2054 --INHFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAI 2116
              .:|.....:.|..|...::.|..:|.||::||.:|||:||.::...|:..|..||.||..||.
Mouse  1614 ADYSHTRRSIHSLCTSHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAA 1678

  Fly  2117 VKIVGLRY-HYFTVPWNVFDFLLVLASIFGILMEDIMID--LPISPTLLRVVRVFRIGRILRLIK 2178
            :|:|...: .:|...||..|..:||.||.||.:|:|.::  |||:||::|::||.||.|:|:|:|
Mouse  1679 LKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLK 1743

  Fly  2179 AAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNVKLQ-----GALDDMVNFQTFG 2238
            .|.|:|.||..:|.:||.:.|:|.|..|:.||||.||:.|||.::..     ..|.....|..||
Mouse  1744 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNFG 1808

  Fly  2239 RSMQLLFRLMTSAGWN----DVLESLMIQPPDCDPFIHGHTNGNCGHPLLAITYFTSFIIISYMI 2299
            .:...|||:.|...||    |.|.....:...|..::          |.|:..||.:|::::..:
Mouse  1809 MAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYL----------PALSPVYFVTFVLVAQFV 1863

  Fly  2300 VINMYIAIILENFNQAHQE-EEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPL- 2362
            ::|:.:|:::::..::::| .|...::.::|:...:.|...|.:|     :|.|.......|.| 
Mouse  1864 LVNVVVAVLMKHLEESNKEAREDAEMDAEIELEIAQGSTAQPPST-----AQESQGTEPDTPNLL 1923

  Fly  2363 ---------GISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVE-ETDNFKQLQEQMDV 2417
                     .:|.||:..:..   |::.....|         .|.|..|| ||            
Mouse  1924 VVRKVSVSRMLSLPNDSYMFR---PVAPAAAPH---------SHPLQEVEMET------------ 1964

  Fly  2418 KFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKERSNSGDSATQTSSPGGWQS 2482
                                           .||                  ..|...||     
Mouse  1965 -------------------------------YTG------------------PVTSAHSP----- 1975

  Fly  2483 KLSALNFFHLQVSRRGTACSSRASSRKSSRASDASDLSELAGPWLNLPLMLVSGADEVVKDIKQQ 2547
                             :...|.|.:..|.||..:.:|:        ||..:|..|         
Mouse  1976 -----------------SLEPRTSFQVPSAASSPARVSD--------PLCALSPRD--------- 2006

  Fly  2548 NDELGKRGSIFVEAPRA-------SRRRSFYNFFLRHQ--DAVDDSL---TSPSVHRKTAMNNTT 2600
                         .||:       .|:.:.:...|..|  ||.:||:   |.|:           
Mouse  2007 -------------TPRSLSLSRILCRQEAMHAESLEGQIDDAGEDSIPDYTEPA----------- 2047

  Fly  2601 NTTSNSASTSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRASSF----IRKKPPL 2661
            ...|.|.:..||..|..      |.|...|.                |.|..:|    |..:||.
Mouse  2048 ENISMSQAPLGTLRSPP------CSPRPASV----------------RTRKHTFGQHCISSRPPT 2090

  Fly  2662 ERGLSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSLSLRPDNATLVHVLVHRESEEYKE 2726
            ..|..|::|                    .|:.|:.:|..| |..|..||..|            
Mouse  2091 LGGDDAEAA--------------------DPADEEVSHITS-SAHPWPATEPH------------ 2122

  Fly  2727 EDESSPSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMDT---CAMPTVQIMVDSPKDPPRG 2788
            ..|:||:.|                 |.:     |:|.|..|.   |:: ..|..:|.|..|...
Mouse  2123 SPEASPTAS-----------------PAK-----GTVGSGRDPHRFCSV-DAQSFLDKPGRPDAQ 2164

  Fly  2789 DFSSAPIDDVGAPIDVNVQGDTSQVFYDYNP-----------------EKATDDQGNGQDETAQF 2836
            .:||..:|:....::   .|:......:..|                 :..|:|:|:.:...|:.
Mouse  2165 RWSSVELDNGDGHLE---SGEVRARASELEPALGARRKKKMSPPCISIDPPTEDEGSSRPPAAEG 2226

  Fly  2837 ESLPDRQRXPPVNTPLRDSEKRSSRG 2862
            .:...|:| |.....|......|:.|
Mouse  2227 GNTTLRRRTPSCEAALHRDCPESTEG 2252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 125..371 CDD:459842 84/298 (28%)
Ion_trans 687..902 CDD:459842 70/224 (31%)
Ion_trans 1751..2019 CDD:459842 102/276 (37%)
Na_channel_gate 2009..2063 CDD:240441 10/64 (16%)
Ion_trans 2067..2320 CDD:459842 90/265 (34%)
GPHH 2332..2378 CDD:465306 10/55 (18%)
Cacna1hXP_006524796.1 Ion_trans 99..430 CDD:459842 95/334 (28%)
Ion_trans 789..1023 CDD:459842 76/244 (31%)
KLF9_13_N-like <1056..1200 CDD:425361 49/498 (10%)
Ion_trans 1304..1576 CDD:459842 102/276 (37%)
Ion_trans 1629..1860 CDD:459842 87/240 (36%)
PHA03247 <1945..2360 CDD:223021 89/522 (17%)

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