DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and tpcn1

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_695923.4 Gene:tpcn1 / 567534 ZFINID:ZDB-GENE-060526-199 Length:811 Species:Danio rerio


Alignment Length:852 Identity:168/852 - (19%)
Similarity:308/852 - (36%) Gaps:279/852 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1738 TRVRTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMIL 1802
            |.|...:|::.:.||..:..|.:...:::.|.              .|..:.|..|      |.|
Zfish   112 TAVLLMLLSLSEAPAVPFLRLDVYVHATLELL--------------ALVMVAFELC------MKL 156

  Fly  1803 KWLALGFSKYFTSFWTILD---FIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAIS-RWQG 1863
            :|  |||..:.....|::.   ..|.|:....:|:.:..:|:|      .|||||:..:. |:.|
Zfish   157 RW--LGFHTFIRHKRTMVKTSVLFIQFIEAIVVLVRQTSHLRV------TRALRPIFLVDCRYCG 213

  Fly  1864 -MRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCI 1927
             :|..:..:..::|...::||:.|.|.:||:|:|...|..                      :..
Zfish   214 AVRRNLRQIFQSLPPFIDILLLLLFFMVIFAILGFCLFSA----------------------NTA 256

  Fly  1928 EQNYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFI 1992
            :..::.:.:.|      :....||..|.|.   :||           .|....|.::.|:|::::
Zfish   257 DHYFSTLENSI------VSLFVLLTTANFP---DVM-----------MPAYSKNRWSCIFFIVYL 301

  Fly  1993 VCGSFFTLNLFIGVIIDNFNMLKK-KYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKV-IKR--- 2052
            ....:|.:||.:.|:.|.||.::| |::.  |.:....:.:|.:..:  :.|::|..| :|:   
Zfish   302 SIELYFIMNLLLAVVFDTFNGVEKMKFKS--LLLHKRSAIEHAFQLL--VSRQRPDGVSLKQFDG 362

  Fly  2053 ----------PINHFLAM------------------FYD-------------------------- 2063
                      |.:.||..                  ||:                          
Zfish   363 LMRFYHPRMTPRDRFLTFKALNHSGAPMLSLQDFYKFYEVIGLKWKARRSGEHWFDDLPRTALLI 427

  Fly  2064 ------LSNSRRFEIA---------IFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGL 2113
                  |..|:.|:.|         |::|:..|||..||....       ::..|...|.|::|:
Zfish   428 FKGINLLVKSKAFQYAMYLVVAVNGIWILVETNMLNDGISWTR-------VVPWSYIIFLTIYGI 485

  Fly  2114 EAIVKIVGL-RYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLI 2177
            |.::||.|| ...||:..||:|||.:.:.:..|:    |.:...:.|....|  |.|..::|||.
Zfish   486 EVLLKITGLGPITYFSSGWNLFDFSVTVFAFLGL----IALAFDMEPFYFIV--VLRPLQLLRLF 544

  Fly  2178 KAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNV-------------------- 2222
            |..:..|.:|..:....|.:.::|..|.:..:.:||:||..|.:|                    
Zfish   545 KIKQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFADVIYPNCCDNSTVAASYRQINV 609

  Fly  2223 ------KLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGNCGH 2281
                  :||.....:.||.....|...||.|.....|...:|.:..|.......           
Zfish   610 TTGNRTELQEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGVTSQTTHWSRL----------- 663

  Fly  2282 PLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQFI 2346
                  ||.:|.|:: |:|:.:.:|.||:.|                 :|.:.:|:         
Zfish   664 ------YFMTFYIVT-MVVMTIIVAFILDAF-----------------VFRMNYSR--------- 695

  Fly  2347 HFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVEETDNFKQL 2411
                     .:.:|   :..|.:...:.|...:|:...:..||    ..||.||    ..|...|
Zfish   696 ---------KNREP---LDDPEDEKGIVFETEVSQTEALQTLD----FYKHTLG----VTNLTSL 740

  Fly  2412 QEQMDVKFKKQFPT-------RKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRK--------RE 2461
            |: |.|..::...|       |...:...|.::::.:      ||..::||.|..        ||
Zfish   741 QD-MCVALERSGQTSLVFLGRRSRTKSDLSMKMYEEE------IQEWYEEYSRTNLQTDGTFHRE 798

  Fly  2462 KERSNSG 2468
            .:..::|
Zfish   799 LDSPDAG 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 54/256 (21%)
Na_channel_gate 2009..2063 CDD:240441 15/86 (17%)
Ion_trans 2085..2320 CDD:278921 60/261 (23%)
GPHH 2331..2386 CDD:293510 6/54 (11%)
tpcn1XP_695923.4 Ion_trans 139..325 CDD:278921 52/255 (20%)
Ion_trans 477..688 CDD:278921 57/251 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.