DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and cacna1ia

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_009297749.2 Gene:cacna1ia / 566351 ZFINID:ZDB-GENE-060503-324 Length:2122 Species:Danio rerio


Alignment Length:2928 Identity:611/2928 - (20%)
Similarity:1039/2928 - (35%) Gaps:997/2928 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 FFDYCVMATILFNCIFLAMTETVEEAE----------------YIFLAIYSIEMVIKIIAKGFLL 175
            :|:...:..||.||:.|.|.:..|..:                |||   :::|||:|::|.| :.
Zfish    12 WFERISIMVILLNCVTLGMYQPCENIDCTSERCQVLQAFDAFIYIF---FALEMVVKMVALG-IF 72

  Fly   176 NKYTYLRNPWNWLDFVVITSGYATIGMEVGNL--AGLRTFRVLRALKTVSIMPGLKTIINALLHS 238
            .:..||.:.||.|||.::.:|.....:::.|:  :.:||.||||.||.::.:|.::.::|.||.:
Zfish    73 GRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINFSAIRTVRVLRPLKAINRVPSMRILVNLLLDT 137

  Fly   239 FRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQ----------VPTDWTNVSHTDWQIWVN 293
            ...|..|:.|..|...:|.:..:|::.|.|||:|..:          :||.:......|.:.::.
Zfish   138 LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTLTSGLTLPTPYYQPEEDDERPFIC 202

  Fly   294 D--TDNWLYDEDELPVLCGNLTGARHCPFE-----------------------YVCLCVG----- 328
            .  .||.:....::|   ....|.|.|..:                       .:.|||.     
Zfish   203 SLAQDNGIMSCSDVP---ARREGGRECCLDKEDALHRQALGLSAEPLVNGSASAMGLCVNWNQYY 264

  Fly   329 -------ENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSVSFFTVVVFFGSFY 386
                   .||:.|..||||..::.:..||:|||:.|..:...|:......:..:|..::..|||:
Zfish   265 TRCHTGHTNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFIFLIIIGSFF 329

  Fly   387 LINLMLAVVALSYEE----EAEITNEERKKDLLDHRDDSTFS--FDPSVLNVKKLNKNNKKKIDS 445
            :|||.|.|:|..:.|    |.::..|:|.:.|    ..||.:  .:|.               |.
Zfish   330 MINLCLVVIATQFSETKQREHQLMQEQRARYL----SSSTLASLAEPG---------------DC 375

  Fly   446 RKGVL-LASYSKKKTRRKKT----------------KGGKEGGTNGNGNGSNGDDNKSHSATPSP 493
            .:.:. |..:..:|.||:..                :|..:||....|.|:|.:..:.|..    
Zfish   376 YEELFQLVCHILRKARRRSAALYYMLRGKAPPPGGGRGRGKGGAGSIGGGANVNGGEKHHC---- 436

  Fly   494 GPSPRHSATERPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPN 558
                 |||             |......:.||..|.....:..::|.|:            :.|.
Zfish   437 -----HSA-------------QTSHCIHETKLDHSSENAVSLSISPNPE------------ECPQ 471

  Fly   559 MLYPSDYKGQLIANSGQPSSNSSGVNRESSQDDSGVVDDHEEQDTTNDMGHVSTVELALSPREVR 623
            .      ...|....|:.|:..|.    :.:::.|.:::.:..:...|....|..:..|..:...
Zfish   472 C------AAALSLKEGEESTGHSA----NGEEEEGALEETDRDENRLDKKRSSDSDDTLKKKRTC 526

  Fly   624 LIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDP 688
            |.||.                                           :.|.:.:..|:.:|...
Zfish   527 LGKCK-------------------------------------------DVWDEIRVKLWGIVESK 548

  Fly   689 LFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMALS-KDFFLCGWN 752
            .|...|.:.|::||..:.:|||...:...|.|::.|.||||:||.|.|:||.|.. .::....:|
Zfish   549 YFNRGIMIAILINTISMGIEHHNQPDELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYN 613

  Fly   753 IFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILV 817
            |||.:||..|:.:||.:...||||||..|||||:||.:....::..|.:::.|:..:....::|:
Zfish   614 IFDGIIVIISVCEIIGQSDGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLM 678

  Fly   818 IVIYIFAVIGMQLFSKDYTPEKFDPDPVP-RWNFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEE 880
            :.|:||:::||.:|...::.:....|.|| |.||:....:.:.:|:||..| |...|::.|.:..
Zfish   679 LFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTS 743

  Fly   881 EQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRK 945
            ...|    ..|:..:..||:::.||.:|:|:..|.:|.                           
Zfish   744 PLAA----LYFVALMTFGNYVLFNLLVAILVEGFQAEG--------------------------- 777

  Fly   946 KRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNR 1010
                                  ||.::::.  ..:::..||..:|.                   
Zfish   778 ----------------------DANRSYSD--DDRSSCNLEETEKK------------------- 799

  Fly  1011 PVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHPLPPTSDSMPPTYESAMMATTGGS 1075
                                 |.|:..|                |...::.|             
Zfish   800 ---------------------DSLQLSD----------------PKISTLTP------------- 814

  Fly  1076 FSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYAND 1140
                ||:   .:|.|...|.                               |.|.|         
Zfish   815 ----NGH---LDLAPAPNAR-------------------------------GFYPS--------- 832

  Fly  1141 QRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLK 1205
                                                             :|||.:.|.       
Zfish   833 -------------------------------------------------ERLSFALGS------- 841

  Fly  1206 SEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISN 1270
                   |.||..||...|:||..|...:.:|                              ..|
Zfish   842 -------RKSSVSSLGRASLEQTTLCPGRASL------------------------------YHN 869

  Fly  1271 VMRSRRPSSQMGQPENETMVEHSEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATK 1335
            ..|..||.                    |.|.......:.||:..|                   
Zfish   870 WGRPARPG--------------------IWSRRSSWNSLGRSSRCL------------------- 895

  Fly  1336 AIMEHIAIITGASERSAADEVVLPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKI 1400
                  .:..|.|.|..:..    .:|.:...|.|.|.                           
Zfish   896 ------GMGGGGSLRVRSPH----CHPAEQESLLSPPP--------------------------- 923

  Fly  1401 DEDFSISNEIRKICDQIHAPFVAMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLI 1465
                          ..:|.|.:                |...|..|.:           :.||| 
Zfish   924 --------------PPLHPPLL----------------PRHFPPRRER-----------RALSL- 946

  Fly  1466 ERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAV 1530
                |:||      .|::....:|.  ||...:.:..|..|.|...:       |.....||   
Zfish   947 ----ELPE------LLQVPGPPLPP--LHPRQRKKSFSGGLGSVGEH-------QDCNGKTP--- 989

  Fly  1531 PATPPTSLKSSIEPPTLAQISSLKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMA 1595
                      |::|..:.::                                         :...
Zfish   990 ----------SVQPQIINEV-----------------------------------------YPQV 1003

  Fly  1596 GQRRRMEHPQSTLDKAASFQSARTESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTR 1660
            ..|:..|..:..||.:..|:                                    .||.....|
Zfish  1004 NTRKDREDLEDELDYSLCFR------------------------------------IQKMMEVYR 1032

  Fly  1661 LTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWF 1725
                                                         ||.|..::.:..|.|     
Zfish  1033 ---------------------------------------------PDWCETREDWSVFLF----- 1047

  Fly  1726 MSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINF 1790
                     ....:.|....:::....|::.||..||::.||:..|...:.:....:..|...|:
Zfish  1048 ---------SPQNKFRLLCQSIIAHKLFDYVVLAFIFSNCITVALERPKILQGSLERLFLTVSNY 1103

  Fly  1791 SFCLIFVVEMILKWLALGF----SKYFTSFWTILDFIIVFVSVFSLLIEENENLK---VLRSLRT 1848
            .|..|||.||.||.:::|.    ..|..|.|.|||..:||||:..:::......|   |||.||.
Zfish  1104 IFTAIFVGEMTLKVVSMGLYIGEQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRL 1168

  Fly  1849 LRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGE 1913
            ||.|||||.|||..|:::||..|:.::..|.|::|:|..|::||.|:|||.|.|||:.|:.    
Zfish  1169 LRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCLG---- 1229

  Fly  1914 LLPITEVNDKWDCIEQNYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQR 1978
             |.:..:.:|.||:..||.|::.|..||::|...::|..:|:.:||:.:|...:||..||.||..
Zfish  1230 -LDVKNITNKSDCLLANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVAVDQQPIT 1293

  Fly  1979 EANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGR 2043
            ..|.:..:||:.|::..|||.||:|:||:::||:..::..|        .|..|......::...
Zfish  1294 NNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQE--------VEEAKRREEKRQRRME 1350

  Fly  2044 KKPQKVIKRP----INHFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSN 2104
            ||.:|..|.|    .:|...|.:.|..|...:|.|..:|.:|::||.:|||.|||::...|:..|
Zfish  1351 KKRRKAQKLPYYASYSHVRLMIHTLCTSHYLDIFITFIICVNVVTMSLEHYSQPHSLEIALKYCN 1415

  Fly  2105 AFFTTVFGLEAIVKIVGLRY-HYFTVPWNVFDFLLVLASIFGILMEDIMID--LPISPTLLRVVR 2166
            .|||:.|.|||::|::...: .:|...||..|..:||.|:.||.:|:|.|.  |||:||::|::|
Zfish  1416 YFFTSTFVLEAVLKLIAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEISAALPINPTIIRIMR 1480

  Fly  2167 VFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNV------KLQ 2225
            |.||.|:|:|:|.|.|:|.||..:|.:||.:.|:|.|..|:.||||.||:.|||.:      ..:
Zfish  1481 VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCE 1545

  Fly  2226 GALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQ-PP---DCDPFIHGHTNGNCGHPLLAI 2286
            | :.....|:.||.:...||::.|...||.:::..:.: ||   .|:|.:.          .::.
Zfish  1546 G-MSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGEYTCNPSLQ----------FISP 1599

  Fly  2287 TYFTSFIIISYMIVINMYIAIILENFNQAHQE-EEIGIVEDDLEM-------FYIRWSKYDPHAT 2343
            .||.||::.:..::||:.:|:::::.:.:::| :|...::.::||       ..|.........|
Zfish  1600 LYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIEMELAQGTLCCIGGGVAVADRT 1664

  Fly  2344 QFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVEETDNF 2408
            ...|....|   .|:.||                              |:.:.|.:.|  |.::.
Zfish  1665 GMGHQGAAS---CSVVPP------------------------------HSPITHPVAH--EPNSI 1694

  Fly  2409 KQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKER----SNSGD 2469
            ::|..          |.::.|.:.|.:.:                  ::...|.|.    :.||.
Zfish  1695 RRLYS----------PAQENLWLDSVSLL------------------IKDSFEGEMLMIDNLSGS 1731

  Fly  2470 SATQTSSPGGWQS-KLSALNFFHLQVSRRGTACSSRASSRKSSRA-SDASDLSELAGPWLNLPLM 2532
            .....|||...:. :.......|:....:.:..|.:.|.:.||.| .|...|.|     .::..|
Zfish  1732 VFHHYSSPPVCKDCRTHPQEQIHMAELEQASLRSEQLSDKSSSPALPDDLSLDE-----QSVYQM 1791

  Fly  2533 LVSGADEVVKDIKQQNDELGKRGSIFVEAPRASRRRSFYNFFLRHQDAVDDSLTSPSVHRKTAMN 2597
            ......|.|.|....::|.|.||:..:.  |:||         .|....:|..|..|.|..|...
Zfish  1792 AAKEGKERVCDECHHSEEPGGRGNSRLR--RSSR---------VHSSGTEDGGTCQSPHHNTPAR 1845

  Fly  2598 NTTN---TTSNSASTSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRASSFIRKKP 2659
            ::..   .:|:|....|.:..::.:....|.||...      |.|.....||.|.|..    .||
Zfish  1846 HSIGGVPCSSSSQEHPGVSGGSSRSNTPVCLPAEFF------HPAAAALPAPPRGRTG----HKP 1900

  Fly  2660 PLERGL-----SAQSALR---VNKNAFV---------------SEASAP-------EVIVTRPSP 2694
               |||     ::.::||   .|.....               ||.|.|       ..||:.|.|
Zfish  1901 ---RGLRLTSPASWASLRSPGANTRLLTTQYPSHSDSSLATGSSEGSLPTTMEEGLSFIVSTPQP 1962

  Fly  2695 ------EQQTHPHSLSLRPDNATLVHVLV----HRESEEYKEEDESSPSVSGNGNGFGVGLDMLS 2749
                  :::|...:.:||| :....|:|.    |:.|....|.|.::.|:. .|:...|||...|
Zfish  1963 LLDTLLDERTSLSTETLRP-SPPATHILQTTRGHQRSRSSCETDINTGSIR-QGSEADVGLVWCS 2025

  Fly  2750 KQ---PPPQIRITTGSVESSMDTCAMPTVQIMVDSPKDPPRGDFSSAPIDDVGAPIDVNVQGDTS 2811
            .:   ...|:..|..|:  |:.:..:|:..:                       |:.|.....|.
Zfish  2026 SEQTCDSQQLSETQSSL--SLTSLLLPSSLV-----------------------PLSVKKCNSTG 2065

  Fly  2812 QVFYDYNPEKATDDQGNGQDETAQFESLPDRQRXPPVNTPLRDSEKRSSRGSR-SSSSSTSSIRS 2875
            .:           |||.   .||| |.:..::....:.:|.::.::|.|..:: :...|||.|..
Zfish  2066 SL-----------DQGT---LTAQ-EKVFTKEPQGNITSPWKERKERQSEAAQGTDGESTSQITI 2115

  Fly  2876 CSS 2878
            ..|
Zfish  2116 AGS 2118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921 67/283 (24%)
Ion_trans 705..902 CDD:278921 65/199 (33%)
Ion_trans 1768..2019 CDD:278921 94/257 (37%)
Na_channel_gate 2009..2063 CDD:240441 12/57 (21%)
Ion_trans 2085..2320 CDD:278921 85/248 (34%)
GPHH 2331..2386 CDD:293510 7/54 (13%)
cacna1iaXP_009297749.2 Ion_trans 12..350 CDD:306908 86/344 (25%)
Ion_trans 547..774 CDD:306908 74/230 (32%)
Ion_trans 1063..1334 CDD:306908 101/275 (37%)
Ion_trans 1378..1633 CDD:306908 91/265 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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