DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and cacna1ha

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_021330381.1 Gene:cacna1ha / 560875 ZFINID:ZDB-GENE-130103-1 Length:2198 Species:Danio rerio


Alignment Length:2938 Identity:642/2938 - (21%)
Similarity:1063/2938 - (36%) Gaps:1075/2938 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 MATILFNCIFLAMTETVE----EAEYIFL---------AIYSIEMVIKIIAKG-FLLNKYTYLRN 183
            |..||.||:.|.|.:..|    ::|:..:         |.:::|||||:||.| |.:|  .||.:
Zfish     1 MLVILLNCVTLGMYQPCEDLKCQSEWCIVLQAFDDCIFAFFAVEMVIKMIALGIFGIN--GYLGD 63

  Fly   184 PWNWLDFVVITSGYATIGMEVGN--LAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVM 246
            .||.|||.::.:|.....::..|  |:.:||.||||.|:.::.:|.::.::..||.:...|..|:
Zfish    64 TWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVL 128

  Fly   247 TLTIFCLMVFALFALQVYMGELRNKCVRQVPT---DWTNVSHTDWQIWVNDTDNWLY----DEDE 304
            .|..|...:|.:..:|::.|.|||:|.  :|:   |..|:|:..           ||    |.::
Zfish   129 LLCFFVFFIFGIVGVQLWAGLLRNRCF--MPSKVRDQYNLSYMS-----------LYYENEDGED 180

  Fly   305 LPVLCGNL--TGARHC----PFE------------------------YVCL--------C-VGE- 329
            .|.:|.:.  .|.:.|    |.:                        |.|:        | .|: 
Zfish   181 NPFICSSSKDNGMKRCSAVPPLKEGVECTLNASFLGHVYSGLSGTGNYSCVNWNQYYSECKPGDL 245

  Fly   330 NPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSVSFFTVVVFFGSFYLINLMLAV 394
            ||:.|..||||..::.:..||:|||:.|.::...|:......:..:|.:::..|||::|||.|.|
Zfish   246 NPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV 310

  Fly   395 VALSYEEEAEITNEERKKDLLDHR-DDSTFS--------FDPSVLNVKKLNKNNKKKIDSRKGVL 450
            :|..:.|..:..|...|:....:| :|||.:        ::..:..|..|.:..|::: ||   :
Zfish   311 IATQFAETKQRENMLMKEQRARYRSNDSTLASYSEPGSCYEEMLKYVSHLYRKVKRRL-SR---I 371

  Fly   451 LASYSKKKTRRKKTKGGKEGGTNGN----GNG----------SNGDDNKSHSATPSPGPSPRHSA 501
            ..|:..|:.::.....|..||.||:    |.|          ........|.:..||.|.....:
Zfish   372 YNSWQSKRRKKVNPNTGAGGGANGHSRHRGYGHWVQSIHSLIQQHQRQHCHLSNGSPSPVATTGS 436

  Fly   502 TERPSALTMQAQKQYQQM------EQQHKLAKSGSGGSN--------NPMAPTPKG----RISFQ 548
            :|   ||.|::....||:      ...|.|:.|.....:        .|...||..    .:|..
Zfish   437 SE---ALEMRSITAGQQLTVSSQPTATHNLSSSTQSVHSIYQGDFREAPQERTPTNVAVPALSRL 498

  Fly   549 DSGMGVKNPNMLYPSDYKGQLIAN-SGQPSSNSSGVNRESSQDDSG--VVDD----------HEE 600
            :.||..  |.:| ||     ||.| ||   ..|.|..|..|..::|  |:.|          |..
Zfish   499 NGGMNY--PTIL-PS-----LICNYSG---GGSLGKERGKSDANTGHEVIQDFDKLHQQIEAHSH 552

  Fly   601 QDTTNDMGHVSTVELALS----PREVRLIKC------NGNIARIKNHNVYALHQEFSSEVVVI-- 653
            ......|..|...:|.|.    |..||.::.      :.:..|.:...||    |||.:...|  
Zfish   553 SRVLLQMAGVVPTQLLLEVMSCPYCVRALESMDLEIGDSDYPRSEGDMVY----EFSYDAGFITG 613

  Fly   654 ----DDLPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSE 714
                ..:.::. :|.|.:      |..|:..|.::|....|...|.:.|::||..:.:|:|...|
Zfish   614 RSAHHKMQEKQ-NRLVQF------WEDFRERLTRIVDSKYFNRGIMIAILINTLSMGIEYHEQPE 671

  Fly   715 SFRNALDVGNKVFTSIFTFECIVKLMALSKDFFLCG-----WNIFDLLIVTASLLDIIFELVDGL 774
            ...|.|::.|.||||:|..|.:.||:|    |.:.|     :||||.:||..|:.:||.....||
Zfish   672 ELTNILEISNIVFTSMFVLEMLFKLLA----FGIFGYIRNPYNIFDGVIVVISVWEIIGHADGGL 732

  Fly   775 SVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEK 839
            ||||..||||||||.:....::..|.:::.|:..:....::|::.|:.|:::||.||...::.:.
Zfish   733 SVLRTFRLLRVLKLVRFLPALRRQLLVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLKM 797

  Fly   840 FDPDPVP-RWNFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMV 902
            .:.|.:| |.||:....:.:.:|:||..| |...|::.|.:.....|    ..|:..:..||:::
Zfish   798 ENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAA----LYFVALMTFGNYVL 858

  Fly   903 LNLFLALLLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVL 967
            .||.:|:|:..|.:|...:|.:  |:|.|.:.:.|                      ||.:|:  
Zfish   859 FNLLVAILVEGFQAEGDANKSD--GDEEKTSVNSE----------------------EKMEQL-- 897

  Fly   968 DAQQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVD 1032
                        |::..|...|     .:.||:.|..  |.|..|                    
Zfish   898 ------------QSSEPLSISD-----PDLKFYSLML--SANGHV-------------------- 923

  Fly  1033 GLEYDDTGDLPEQIQLQ--AHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAE 1095
                |..|.||..|.::  |.|:|....|:.|  ||....|.....|:|:               
Zfish   924 ----DPCGTLPPPIIMRTAATPMPTPKSSLGP--ESVFDLTESRRGSAVS--------------- 967

  Fly  1096 RRLQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSR 1160
                                                  .||.|.||:| ..|..|.......|..
Zfish   968 --------------------------------------IDPNAFDQKS-LSSPRRSPCHPRGSGS 993

  Fly  1161 RYGSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSI 1225
            .:||.       :...:.|.|:||.:                         |:.:||        
Zfish   994 NWGSR-------RSSWNSLGRAPSLK-------------------------RKDTSG-------- 1018

  Fly  1226 EQDELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMV 1290
            |::.|||.:|                         :|                            
Zfish  1019 ERESLLSGEG-------------------------RG---------------------------- 1030

  Fly  1291 EHSEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADE 1355
                      |||.:..|.:        ||:|:|..|          ::|.:             
Zfish  1031 ----------SFEDDDIEAE--------KLTNISGGS----------LQHPS------------- 1054

  Fly  1356 VVLPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAP 1420
                     |.|:..:|:..:.:....:.|.:                                 
Zfish  1055 ---------SLDIPELPQMGEYLDCNGRSQHI--------------------------------- 1077

  Fly  1421 FVAMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIES 1485
                    :|..|||                             :.:.:.:.||:          
Zfish  1078 --------LADLSAS-----------------------------LNKEDSIAEED---------- 1095

  Fly  1486 EKMPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQI 1550
                                                                             
Zfish  1096 ----------------------------------------------------------------- 1095

  Fly  1551 SSLKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQ 1615
                                                                     ||.:..|:
Zfish  1096 ---------------------------------------------------------LDDSFCFR 1103

  Fly  1616 SARTESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGG 1680
            ..||                                                 |.:|.       
Zfish  1104 LRRT-------------------------------------------------LAAYK------- 1112

  Fly  1681 RRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDH----FYFRCP---WFMSCMDTQSAKHWT 1738
                                          |:.|.||    .|...|   :.|.|....|.|   
Zfish  1113 ------------------------------PKWCKDHEEWSLYLFSPHNKFRMMCQKLISHK--- 1144

  Fly  1739 RVRTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILK 1803
                         .|::.|||.||.:.||:..|..::.:::.|  .|...|:.|.:|||.||.:|
Zfish  1145 -------------MFDYVVLVFIFLNCITIALERPHIQQSERL--FLLVSNYVFTVIFVAEMTVK 1194

  Fly  1804 WLALGF----SKYFTSFWTILDFIIVFVSVFSLLIE----ENENLKVLRSLRTLRALRPLRAISR 1860
            .:||||    ..|..|.|.:||.::||||:..:|:.    .|....:||.||.||.|||||.|||
Zfish  1195 VVALGFYSGNQSYLKSTWNVLDGVLVFVSLIDILVSLAWTGNRIFGILRVLRLLRTLRPLRVISR 1259

  Fly  1861 WQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWD 1925
            ..|:::||..|:.::..|.|::|:|..|:::|.|:|||.|.||||.|  |.|:...||   :|.|
Zfish  1260 APGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFFHC--EGGDTRNIT---NKSD 1319

  Fly  1926 CIEQNYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVI 1990
            |::.|..||..|..||::|...::|..::..:||:.:|.|.:||.|||.||:|..|.:..:||:.
Zfish  1320 CLQANLKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPERNHNPWMLLYFIS 1384

  Fly  1991 FIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKP---QKVIKR 2052
            |::..|||.||:|:||:::||:..::..|.....:...:.||    .|:|..|.|.   .:.::|
Zfish  1385 FLLIVSFFVLNMFVGVVVENFHKCRQDQEEVEARLLELKRQK----LMEKKRRSKENCGSEALRR 1445

  Fly  2053 P----------------INHFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILE 2101
            |                .||:|.:|            |..:|.:|::||.|||::||..:...|:
Zfish  1446 PYYADYSPARLYIHTLCTNHYLDLF------------ITGIICINVVTMSIEHFNQPSYLDEALK 1498

  Fly  2102 VSNAFFTTVFGLEAIVKIV--GLRYHYFTVPWNVFDFLLVLASIFGILMEDIMID--LPISPTLL 2162
            ..|..||.:|.:||::|:|  |:| .:|...||..|..:||.||.||.:|:|.::  |||:||::
Zfish  1499 YCNYVFTIIFIIEALLKLVAFGIR-RFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINPTII 1562

  Fly  2163 RVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFG------N 2221
            |::||.||.|:|:|:|.|.|:|.||..::.:||.:.|:|.|..|:.||||.||:.|||      |
Zfish  1563 RIMRVLRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECTEN 1627

  Fly  2222 VKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWN----DVLESLMIQPPDCDPFIHGHTNGNCGHP 2282
            ...:| |.....|:.||.:...|||:.|...||    |.|...:.....|..::          |
Zfish  1628 NPCEG-LSPHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECLPSETQCLSYL----------P 1681

  Fly  2283 LLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEE----------EIGIVEDDLEMFYI---- 2333
            .::..||.:|::::..:::|:.:|:::::..::::|.          ::.|:::...:..|    
Zfish  1682 WVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAAIKLAILKETRRLSTISASA 1746

  Fly  2334 ------RWSKYDPHATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCL---- 2388
                  |.:..:||..             |.:...|:.:.....|....:.:|   ::|.|    
Zfish  1747 TAGPEGRATYIEPHPD-------------SPEQDEGMQRTQGNLLSPRKMSVS---RMHSLPNDS 1795

  Fly  2389 ----DILHALVKHVLGHVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQ 2449
                .:..|...:.|..||...::                    ||:.|.|.:..:..::...:|
Zfish  1796 YMFRPVRPASAPYPLEEVETCQDY--------------------LELGSITSVHSQPCESLSLLQ 1840

  Fly  2450 -----------------------TGWKEYLRRKREKERSNSGDSATQTSSPGGWQSKLSALNFFH 2491
                                   |...:.:.|::...:::|.|.....|.....:.|......|.
Zfish  1841 VPGVPPHSQFNCLPKIPPPMPSPTHSIDRILRRQRAIKNDSIDMHNFDSKENVERQKGITTGSFK 1905

  Fly  2492 LQVSR-------------RGTACSS--------RASSRKSSRASDASDLSELAGPWLNLPLMLVS 2535
            |.|.:             ||.:..:        ..|||..|.||.:...|....        :..
Zfish  1906 LHVPQITGISQGSPLLPPRGPSVHTFQQPHSQHNISSRPPSLASSSRSTSPSGS--------MFD 1962

  Fly  2536 GADEVVKDIKQQNDELGKRGSIFVEAPRASRRRSFYNFFLRHQDAVDDSLTSPSVHRKTAMNNTT 2600
            .||...::::..|                |..|.:...   |.:|...|| ||            
Zfish  1963 SADPTDEEVRHIN----------------STARLWIGV---HAEARSHSL-SP------------ 1995

  Fly  2601 NTTSNSASTSGTASSTATAPATGCGPAAT---------------------SASDSDRHQAV---G 2641
                  .|||||   ....|...|..||.                     .|||..|..::   .
Zfish  1996 ------YSTSGT---LLPIPVKNCSSAANLTIKDPKKCFSVDTEGFLERPYASDDHRRHSIEICS 2051

  Fly  2642 GGS-------------APSRKRASSFIRK----------KPPLERGLS-AQSALRVNKNAFVSEA 2682
            .|.             .|:|.::....||          :||.|:.:| :.::::...::.:...
Zfish  2052 SGDDGLFGQELCEKRHVPTRGKSLHIPRKTKMSPPCISIEPPFEKDVSPSHASMKKLSDSMLLRR 2116

  Fly  2683 SAP--EVIVTRPS---PEQQTHPHSLSLRPDNATLVHVLVH-RESEEYKEEDESSPSVSGNGNGF 2741
            ..|  ::.:.|.|   ||.|     ||.:|    |:.|..| ....||......:| :||.    
Zfish  2117 RTPSYDLALQRDSLDLPENQ-----LSTQP----LIKVERHPSHCAEYLSLPHPAP-MSGL---- 2167

  Fly  2742 GVGLDMLSKQPPP 2754
             .|:...|.||||
Zfish  2168 -AGVLCESTQPPP 2179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921 73/277 (26%)
Ion_trans 705..902 CDD:278921 65/203 (32%)
Ion_trans 1768..2019 CDD:278921 101/258 (39%)
Na_channel_gate 2009..2063 CDD:240441 15/72 (21%)
Ion_trans 2085..2320 CDD:278921 85/258 (33%)
GPHH 2331..2386 CDD:293510 8/64 (13%)
cacna1haXP_021330381.1 Ion_trans 1..323 CDD:306908 92/336 (27%)
Ion_trans 644..871 CDD:306908 74/234 (32%)
Ion_trans 1143..1413 CDD:306908 110/292 (38%)
Ion_trans 1464..1695 CDD:306908 90/254 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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