DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and tpcn3

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_001170916.1 Gene:tpcn3 / 557460 ZFINID:ZDB-GENE-141215-16 Length:773 Species:Danio rerio


Alignment Length:894 Identity:172/894 - (19%)
Similarity:314/894 - (35%) Gaps:347/894 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1640 KTEQSQSTAPDATQKPSAFT------------RLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPM 1692
            |||::..|    ..|...||            ::||| :.....||.|          ..||..:
Zfish     5 KTEKTSHT----LTKDEGFTNGGNHVPSNVTDQMTEK-FDLATVYVSD----------AKYNRNI 54

  Fly  1693 TFPSYGATKAAKVPDDCFPQK-----CYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPA 1752
            .|             |..||.     .|:|      |||     |:..:...:....|.:.:.||
Zfish    55 FF-------------DTSPQAVKLYLLYNH------WFM-----QTLVYVFIIINLALALFEDPA 95

  Fly  1753 FEWFVLVLIFASSI--TLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFSKYFTS 1815
               .|.:.|:|:|.  |:|..                 .|:..:|...::|.|          ..
Zfish    96 ---VVPLPIWATSTIETICLS-----------------AFTVRIIHYAKVIPK----------DK 130

  Fly  1816 FW----TILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQG--MRIVVNALMYA 1874
            ||    .|...|||.:|...::|...........:|..|.||||..::..:|  :|....::..|
Zfish   131 FWKDPKNICIIIIVTLSFIDMVIYGALKATGHYGIRWSRVLRPLLLVNVTEGRQLRRAFRSIRNA 195

  Fly  1875 IPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNYTWINSKIT 1939
            :|.|..|..:.:...|:||:|.::.||.:....:|                              
Zfish   196 LPQISYVFFLFMFSVLVFSLMALKLFGKRGLLTIN------------------------------ 230

  Fly  1940 FDHVGMGYLALLQVATFEGWMEVMAD----AVDARGVD-LQPQREANLYAYIYFVIFIVCGSFFT 1999
                |..|        |..:|:::.|    ...|...| :.|...:::|..|:|:::||..::..
Zfish   231 ----GSPY--------FTDYMDIVFDLYVLVTTANSPDVMMPAYNSSVYFTIFFILYIVINTYTF 283

  Fly  2000 LNLFIGVIIDNFNMLKKKY----------------------------EGG--------------- 2021
            ::.|:.|:.:|:    |||                            |||               
Zfish   284 MSFFLAVVYNNY----KKYLKEEVRQLVKAKRIKMCRAFSLLQENRGEGGEPVVTQANWNHLVKL 344

  Fly  2022 -------------------------------------VLEMFLTESQKH-YYTAMKKLGRKKPQK 2048
                                                 .:::...:||.| .......|....|.:
Zfish   345 VKPKISTAHRELLWSVLDDQNKGHIGKFAFVQLADLLSIQVITVKSQAHPIQICFPSLYNSLPSR 409

  Fly  2049 VIKRPINHFLAMF-YDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNA--FFTTV 2110
            .|::.::|.:.:: |||            :|.:|.:.:|:   |:.:.|     ||||  .|..:
Zfish   410 FIRQMVHHRVFVYAYDL------------IILVNAVFIGL---DEENPV-----VSNAEWGFLAL 454

  Fly  2111 FGLEAIVKIVGLRYHYFTVP---------WNVFDFLLVLASIFGILMEDIMIDLP--ISPTLLRV 2164
            :.||.::|:      |.|.|         ||.||.::|::::||.::...:....  .|..:|.:
Zfish   455 YMLEILLKL------YATEPRAFFARHQFWNWFDTIIVVSALFGTIINSALKHSGGYTSRQVLDI 513

  Fly  2165 VRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF---------- 2219
            |.:.|:.|::|::.:.|..|.::..|:...|.:...|.|:.::.:|:|::||.||          
Zfish   514 VFILRVLRLIRVVDSIKRFRAIINTLIKIGPTILTFGQLILVVYYIFAMVGMELFKGKIQFFEPN 578

  Fly  2220 ---------GNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLES--LMIQPPDCDPFIHG 2273
                     ||..|:......:|:              ....:|||:.|  |:::....:.: |.
Zfish   579 STSPDREYCGNPLLKSTSFAKLNY--------------CKNNFNDVISSFILLLELTVVNQW-HV 628

  Fly  2274 HTNGNCGHPLLAIT------YFTSFIIISYMIVINMYIAIILENF---------------NQAHQ 2317
            .|:|     ..|:|      :|..|.|:..:|:||:::|.|||.|               .:..:
Zfish   629 LTSG-----FTAVTHVSARLFFVIFHIVVVIIIINIFVAFILEAFLVEYTVDKSELQTSLEKKIE 688

  Fly  2318 EEEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPLGISK 2366
            |.|:.:.:|.::                   :.|.|.:.:.|..||.|:
Zfish   689 ELELNVQQDGVD-------------------TGLVDAMETNDSDLGSSE 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 51/289 (18%)
Na_channel_gate 2009..2063 CDD:240441 14/135 (10%)
Ion_trans 2085..2320 CDD:278921 65/289 (22%)
GPHH 2331..2386 CDD:293510 6/36 (17%)
tpcn3NP_001170916.1 Ion_trans 73..295 CDD:395416 58/298 (19%)
Ion_trans 417..>571 CDD:395416 45/179 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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