Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038946935.1 | Gene: | Cacna1e / 54234 | RGDID: | 2246 | Length: | 2465 | Species: | Rattus norvegicus |
Alignment Length: | 2892 | Identity: | 631/2892 - (21%) |
---|---|---|---|
Similarity: | 1076/2892 - (37%) | Gaps: | 931/2892 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 FTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFLA------------MTETVEEA 152
Fly 153 EYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSG-YATIGMEVG---NLAGLRTF 213
Fly 214 RVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQVPT 278
Fly 279 DWTNVSHTDWQIWVNDTDNWLYDEDELPVLCGNLTGARHCPFEYVCL-CVGENPNHGYTNFDNFM 342
Fly 343 WSMLTTFQLITLDYWENV-YNMVLATCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEEEAEIT 406
Fly 407 NEERKKDLLDHRDDSTFSFDPSVLNVKKLNKNNKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGG 471
Fly 472 TNGNGNGSNGDDNKSHSATPSPGPSPRHSATERPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNP 536
Fly 537 MAPTPKGRISFQDSGMGVKNPNMLYPSDYKGQLIANSGQPSSNSSGVNRESSQDDSGVVDDHEEQ 601
Fly 602 DTTNDMGHVSTVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVH 666
Fly 667 WCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIF 731
Fly 732 TFECIVKLMALS-KDFFLCGWNIFDLLIVTASLLDIIFELVD-----GLSVLRGLRLLRVLKLAQ 790
Fly 791 SWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVPRWNFNDFFH 855
Fly 856 SFMMIFRILCGE-WIEPLWDCMRAEEEQGASTCFAIFLPTLVM-GNFMVLNLFLALLL-NSFNSE 917
Fly 918 ELKSKKEEVGEESKLARSIERVRDL----------IRKKRQER-------------KDRKERKFA 959
Fly 960 EKFQQIVLDAQQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMN---------RPVSGS 1015
Fly 1016 DFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHPL------PPTSDSMPPTYESAMMATTGG 1074
Fly 1075 SFSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYAN 1139
Fly 1140 DQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLL 1204
Fly 1205 KSEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRIS 1269
Fly 1270 NVMRSRRPSSQMGQPENETMVEHSEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEAT 1334
Fly 1335 KAIMEHIAIITGASERSAADEVVLPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRK 1399
Fly 1400 IDEDFSISNEIRKICDQIHAPFVAMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSL 1464
Fly 1465 IERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPA 1529
Fly 1530 VPATPPTSLKSSIEPPTLAQISSLKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSM 1594
Fly 1595 AGQRRRMEHPQSTLDKAASFQSARTESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFT 1659
Fly 1660 RLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPW 1724
Fly 1725 FMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLVLIFASSITLCFED---INLDKNKTLKRVLY 1786
Fly 1787 WINFSFCLIFVVEMILKWLALGF----SKYFTSFWTILDFIIV------FVSVFSLLIEENENLK 1841
Fly 1842 VLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFK 1906
Fly 1907 CVNEMGELLPITEVNDKWDCIEQNYT-------------WINSKITFDHVGMGYLALLQVATFEG 1958
Fly 1959 WMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVL 2023
Fly 2024 EMFLTESQK---HYYTAMKKLGRKKPQK--VIKRPINHFLAMFYDLSNSRRFEIAIFVLIFLNML 2083
Fly 2084 TMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRY-HYFTVPWNVFDFLLVLASIFGIL 2147
Fly 2148 MEDIMIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYA 2212
Fly 2213 ILGMSLFGNVKL--QGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHT 2275
Fly 2276 NGN----CGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWS 2336
Fly 2337 KYDPHATQFIHFSQLSDFIASLDPPLGISK--PNNVA---LVSFNLPISKGNKIHCLDILHALVK 2396
Fly 2397 HVL------GHVEETDNFKQLQEQ------------------------------------MDV-- 2417
Fly 2418 --KFKKQFPTRKELEIVSSTRIWKRQEKAA--KTIQTGWKEYLRRKREKERSNSGDSATQTSSPG 2478
Fly 2479 GWQSKLSALNFFHL---------QVSRRGTACSSR---ASSRKSSRASD-----ASDLSELAG-- 2524
Fly 2525 -----PWLNLPLMLVSGADEV------VKDIKQQN----DELG-KRGSIFVEAPRASRRRSFYNF 2573
Fly 2574 FLR-----------HQDAVDDS-------------LTSPSVHRKTAMNNTTNT------TSNSAS 2608
Fly 2609 TSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRASSFIRKKPPLERGLSAQSALRV 2673
Fly 2674 NKNAFV-----SEASAP---------EVIVTRPS----PEQQTHP---HSLSLRPDNATLVHVLV 2717
Fly 2718 HRES--EEYKEED----ESSPSVS-GNGNGFG 2742 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 75/224 (33%) |
Ion_trans | 705..902 | CDD:278921 | 57/204 (28%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 83/276 (30%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 10/58 (17%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 77/241 (32%) | ||
GPHH | 2331..2386 | CDD:293510 | 19/59 (32%) | ||
Cacna1e | XP_038946935.1 | Ion_trans | 235..509 | CDD:395416 | 97/301 (32%) |
Ion_trans | 622..861 | CDD:395416 | 71/242 (29%) | ||
Ion_trans | 1301..1535 | CDD:395416 | 78/246 (32%) | ||
Ion_trans | 1625..1882 | CDD:395416 | 84/259 (32%) | ||
GPHH | 1891..1944 | CDD:407139 | 18/52 (35%) | ||
Ca_chan_IQ | 1955..2028 | CDD:400901 | 9/72 (13%) | ||
Atrophin-1 | 2170..>2429 | CDD:397323 | 64/271 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |