Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008760136.1 | Gene: | Scn3a / 497770 | RGDID: | 3635 | Length: | 1983 | Species: | Rattus norvegicus |
Alignment Length: | 2597 | Identity: | 818/2597 - (31%) |
---|---|---|---|
Similarity: | 1178/2597 - (45%) | Gaps: | 843/2597 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 EKAVAKHQVVAYTQRSQVKHENRHIQLVREYGFHPRTKASVEDGDVLPRKFEPFPEHMYGKPLEE 75
Fly 76 IDT-FIYEETFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFN 139
Fly 140 CIFLAMT---ETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Fly 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMG 266
Fly 267 ELRNKCVRQVPTD--------------------WTNV--SHTDWQIWV-NDTDNWLYDEDELPVL 308
Fly 309 CGNLTGARHCPFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSV 373
Fly 374 SFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNEERKKDLLDHRDDSTFSFDPSVLNVKKLNKN 438
Fly 439 NKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGDDNKSHS-ATPSPGPSPRHSAT 502
Fly 503 ERPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPNMLYPSD--- 564
Fly 565 ----------------YKGQLIANSGQPSSNSS-------------GVNRESSQDDSGVVDDHEE 600
Fly 601 QDTTNDMGH-------VSTVELALSPREV----------RLIKCNGNIARIKNHNVYALHQEFSS 648
Fly 649 EVVVIDDLPD-------------------------RNCDRCVH--------W-CTDYESWLQFQN 679
Fly 680 CLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMALSK 744
Fly 745 -DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGA 808
Fly 809 LGNLTLILVIVIYIFAVIGMQLFSKDYTP--EKFDPD-PVPRWNFNDFFHSFMMIFRILCGEWIE 870
Fly 871 PLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSEELKSKKEEVGEESKLARS 935
Fly 936 IERVR---DLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQAAVGLERGDKPGVLAET 997
Fly 998 KFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHPLPPTSDSMPP 1062
Fly 1063 TYESAMMATTGGSFSS-----VNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYDSREEATYTES 1122
Fly 1123 IELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRSPSYRK 1187
Fly 1188 SLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREELLNCDQKELFQF 1252
Fly 1253 LQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSEFDNIIQ---SFEKELEEIKRSTT 1314
Fly 1315 SLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYDSYDLSSVPRRSQSVS 1379
Fly 1380 AAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAVAATSASQAQPNQSPF 1444
Fly 1445 LRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLRLDSLSLKST 1509
Fly 1510 NSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPLAALTEHQQHFHATSI 1574
Fly 1575 QAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAADASSALALAMAQ 1639
Fly 1640 KTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGATKAAK 1704
Fly 1705 VPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLVLIFASSITLC 1769
Fly 1770 FEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFSKYFTSFWTILDFIIVFVSVFSLLI 1834
Fly 1835 EE--NENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGV 1897
Fly 1898 QFFGGKFFKCVN-EMGELLPITEVNDKWDC--IEQNYTWINSKITFDHVGMGYLALLQVATFEGW 1959
Fly 1960 MEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVLE 2024
Fly 2025 MFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEH 2089
Fly 2090 YDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMID 2154
Fly 2155 LPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2219
Fly 2220 GNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLM-IQPPDCDP-FIH--GHTNGNCG 2280
Fly 2281 HPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQF 2345
Fly 2346 IHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVEETDNFKQ 2410
Fly 2411 LQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKERSNSGDSAT 2472 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 113/241 (47%) |
Ion_trans | 705..902 | CDD:278921 | 104/200 (52%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 155/255 (61%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 32/53 (60%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 125/238 (53%) | ||
GPHH | 2331..2386 | CDD:293510 | 31/54 (57%) | ||
Scn3a | XP_008760136.1 | Ion_trans | 149..434 | CDD:278921 | 132/284 (46%) |
Na_trans_cytopl | 510..629 | CDD:288761 | 20/137 (15%) | ||
Ion_trans | 760..955 | CDD:278921 | 102/197 (52%) | ||
Na_trans_assoc | 981..1183 | CDD:284034 | 71/830 (9%) | ||
Ion_trans | 1206..1460 | CDD:278921 | 153/253 (60%) | ||
Na_channel_gate | 1452..1504 | CDD:240441 | 32/53 (60%) | ||
Ion_trans | 1526..1764 | CDD:278921 | 124/237 (52%) | ||
ChtBD1 | 1691..>1726 | CDD:302575 | 15/34 (44%) | ||
GPHH | 1776..1831 | CDD:293510 | 31/54 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.720 |