DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and na

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_001096981.2 Gene:na / 45338 FlyBaseID:FBgn0002917 Length:2233 Species:Drosophila melanogaster


Alignment Length:2807 Identity:494/2807 - (17%)
Similarity:862/2807 - (30%) Gaps:1209/2807 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 CIFLAMT----------ETVEEAEYIFLA-------IYSIEMVIKIIAKGFLLNKYTYLRNPWNW 187
            |..:::|          |.....::|..|       :::.||:.|:..:|.|..:..||::.|..
  Fly   365 CALVSLTSVSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAKMHIRGVLHGEVPYLKDHWCQ 429

  Fly   188 LDFVVITSGYATIGMEV----------GNLAGLRTFRVLRALKTVSI-----MPGLKTIINALL- 236
            .|..:::..:.:|.:::          ..|:.:|..|.|..::.:.:     ||  |:.||.:. 
  Fly   430 FDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVFLKFSMP--KSRINQIFK 492

  Fly   237 HSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQVPTDWTNVSHTDWQIWVNDTDNWLYD 301
            .|.:|:..|....:|.:.::.|..:| :.|||:|.||                  :|:|:   ||
  Fly   493 RSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCV------------------MNNTE---YD 535

  Fly   302 EDELPVLCGNL------------TGARHCPFEYVCLCVGENPNH--GYTNFDNFMWSMLTTFQLI 352
            ..:.|:|..|.            .....|....||:.:....::  |:..|::...|:.|.:|..
  Fly   536 LYKRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNGFEDIATSIFTVYQAA 600

  Fly   353 TLDYWENV-YNMVLATCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNEERKKDLLD 416
            :.:.|..: |..:.:.....:..:|:.::||.::.:.|:.:||:..::.|               
  Fly   601 SQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVFIAVITETFNE--------------- 650

  Fly   417 HRDDSTFSFDPSVLNVKKLNKNNKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNG 481
                                                                             
  Fly   651 ----------------------------------------------------------------- 650

  Fly   482 DDNKSHSATPSPGPSPRHSATERPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPMAPTPKGRIS 546
                                          .:.|:|||           .|:...:..|      
  Fly   651 ------------------------------IRVQFQQM-----------WGARGHIQKT------ 668

  Fly   547 FQDSGMGVKNPNMLYPSDYKGQLIANSGQPSSNSSGVNRESSQDDSGVVDDHEEQDTTNDMGHVS 611
                                                   .:||..||           ||.|.  
  Fly   669 ---------------------------------------AASQILSG-----------NDTGW-- 681

  Fly   612 TVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVHWCTDYESWLQ 676
                                                 .:|.|||              :....|.
  Fly   682 -------------------------------------RLVTIDD--------------NKHGGLA 695

  Fly   677 FQNCLYKVVRDPLFELAITLCIVLN---TAFLAMEHHGMSESFRNALDVGNKVFTSI-FTFECIV 737
            .:.| :.::|.|.|.:.:...|:.|   ||.:..:|.|...      ||..:.:..| ..|.|::
  Fly   696 PETC-HAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPR------DVFYERYYYIELVFTCLL 753

  Fly   738 KLMALSKDFFLCGW--------NIFDLLIVTASLLDII-FELVDGLSVLRGLRLLRVLKLAQSWT 793
            .|..|.|.:.| ||        :.|:||:...:.|.|: .....||:..:.||::|::|.:    
  Fly   754 DLETLFKIYCL-GWRGYYKHSIHKFELLLAAGTTLHIVPMFYPSGLTYFQVLRVVRLIKAS---- 813

  Fly   794 TMKVLLSIIISTIG---ALGNLTLILVIVIYIFAVIGMQLFS--KDYTPEKFDPDPVPRWNFNDF 853
              .:|...:....|   .||:|.:..:.::.|.:.|.||||.  .|:|            .|..|
  Fly   814 --PMLEGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLFCFLCDFT------------KFESF 864

  Fly   854 FHSFMMIFRILCGE-WIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSE 917
            ..:||.:|:||..| |:|.:.:.|....:.........|:...:....:||:||:|::|::...:
  Fly   865 PEAFMSMFQILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVILDNLELD 929

  Fly   918 ELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQAA 982
            |                              :.|..|:.||.|:..:|        .:||..:..
  Fly   930 E------------------------------DIKKLKQLKFREQSAEI--------KETLPFRLR 956

  Fly   983 VGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQ 1047
            :..:..|.|.:   |..||:                                             
  Fly   957 IFEKFPDSPQM---TILHRI--------------------------------------------- 973

  Fly  1048 LQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYD 1112
                   |....:|...||.|                              :|.:          
  Fly   974 -------PNDFMLPKVRESFM------------------------------KHFV---------- 991

  Fly  1113 SREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKS 1177
                      |||       :|:                |||.:|..|............:.||.
  Fly   992 ----------IEL-------ETE----------------DSLVENCKRPMSECWESNVVFRKQKP 1023

  Fly  1178 LLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREELL 1242
            :                        .:.::.|::|  ::|.||..::|  ..:::...|.|  |:
  Fly  1024 V------------------------RIMNKTAKVR--AAGSSLRKLAI--THIINDSNNQR--LM 1058

  Fly  1243 NCDQKELFQFLQEEEELQKGTK----LRRISNVMRSRRPSSQMGQPENETMVEHSEFDNIIQSFE 1303
            ..|...|         ...|||    |:....:..|:           ...|:..:|.:      
  Fly  1059 LGDSAML---------PVVGTKGGGGLKSQGTITHSK-----------PWRVDQKKFGS------ 1097

  Fly  1304 KELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYDSYDL 1368
               ..|:||..|...||              |...||:                     .::.|:
  Fly  1098 ---RSIRRSVRSGSIKL--------------KQTYEHL---------------------MENGDI 1124

  Fly  1369 SSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAVAATS 1433
            ::.||.:   |..|:...:.:|....::|:.         |:|:                     
  Fly  1125 AAAPRAN---SGRARPHDLDIKLLQAKRQQA---------EMRR--------------------- 1156

  Fly  1434 ASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQ 1498
                  ||.....|:..||   ||....|        ||.|.:        ..|:.:|.:|....
  Fly  1157 ------NQREEDLRENHPF---FDTPLFL--------VPRESR--------FRKICQKIVHARYD 1196

  Fly  1499 LRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPLAALT 1563
            .||..                              |.|..:..::..:|                
  Fly  1197 ARLKD------------------------------PLTGKERKVQYKSL---------------- 1215

  Fly  1564 EHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAAD 1628
                                        |:..|                                
  Fly  1216 ----------------------------HNFLG-------------------------------- 1220

  Fly  1629 ASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMT 1693
                                                    ||:|:|                   
  Fly  1221 ----------------------------------------LVTYLD------------------- 1226

  Fly  1694 FPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVL 1758
                                                                         |   
  Fly  1227 -------------------------------------------------------------W--- 1227

  Fly  1759 VLIFA---SSITLCFEDIN---LDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGF----SKYF 1813
            |:|||   |.|::.||..|   :| :.||:...|    .|.:...:|:.||.||.|.    ..|.
  Fly  1228 VMIFATTLSCISMMFETPNYRVMD-HPTLQIAEY----GFVIFMSLELALKILADGLFFTPKAYI 1287

  Fly  1814 TSFWTILDFIIVFVSV-----FSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMY 1873
            ......||..|..||.     ..|.|..|...::   |..||.:||||..:....||.||..|..
  Fly  1288 KDVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQL---LMILRCVRPLRIFTLVPHMRKVVYELCR 1349

  Fly  1874 AIPSIF--NVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCI--------- 1927
            ....|.  :.||:.|:|  ||:..|||.:||:..:| |:       ..::.:.||:         
  Fly  1350 GFKEILLVSTLLILLMF--IFASYGVQLYGGRLARC-ND-------PTISRREDCVGVFMRRVFV 1404

  Fly  1928 ---------EQNY-------TWIN-SKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQ 1975
                     :::|       .|.| .:..||::|...|.|.:|.:|:||::|....:.|.|    
  Fly  1405 TKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAVG---- 1465

  Fly  1976 PQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKK 2040
                 .::| :|..|:|..|....|.||:||:|.|::    :.:|..|   ||..|:.:....|:
  Fly  1466 -----PVHA-VYIHIYIFLGCMIGLTLFVGVVIANYS----ENKGTAL---LTVDQRRWCDLKKR 1517

  Fly  2041 LGRKKPQKVIKRPINHFLAMF-YDLSNSRRFEIAIFVLIFLNMLTMGIE------HYDQPHAVFF 2098
            |...:|..:..||....:..| ||::....|:..|.|::.:|.:.:.|.      |.::      
  Fly  1518 LKIAQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTER------ 1576

  Fly  2099 ILEVSNAFFTTVFGLEAIVKIVGLRYH-YFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLL 2162
             |.:.:|..|.||.:|.::|.:..... |:....|.:|.|:.:|.:..|:::          |:|
  Fly  1577 -LVIVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIILQ----------TIL 1630

  Fly  2163 R------------VVRVFRI-GRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAIL 2214
            |            ::|.|.| |:...|       :.|:..:.||:...|.|...:.|:.|.||:.
  Fly  1631 RNDLSYFFGFMVVILRFFTITGKHTTL-------KMLMLTVGVSVCKSFFIIFGMFLLVFFYALA 1688

  Fly  2215 GMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGN- 2278
            |..|||.||....:....||.:....:.:|||::|...||.::...|:|||.|       |.|| 
  Fly  1689 GTILFGTVKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYC-------TLGNN 1746

  Fly  2279 -----CGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVE-DDLEMFYIRWSK 2337
                 ||:...::.||.:|.:|...||:|:.:|||:|||:..:..||..::. .|:..|...|:.
  Fly  1747 YWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNI 1811

  Fly  2338 YDPHATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHC---LDILHALVKHVL 2399
            .|.|....|                      .|..|.|.|.:.|| ::.|   .|.|  |.|::.
  Fly  1812 VDIHQRGVI----------------------PVRRVKFILRLLKG-RLECDPQKDRL--LFKYMC 1851

  Fly  2400 GHVEETDNFKQL----------QEQMDVKFKKQFP---TRKELEIVSSTRIWKRQEKAAKTIQTG 2451
            ..:::..|.:.:          ...:|::...|..   .|:|.|.:      ..:|.|..||:|.
  Fly  1852 YELDKLHNGEDVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYL------VEEEVAKMTIRTW 1910

  Fly  2452 WKEYLRRKREKERSNSGDSATQTSSPGGWQSKLSALNFFHLQVSRRGTACSSRASSRKSSRASDA 2516
            .:..|::.|.:..|...:|.            ::.|...:.|...|......:|    ...|.|.
  Fly  1911 LEGCLKKIRAQNASKQQNSL------------IAGLRATNEQPVMRPNIQEDKA----PLGAVDK 1959

  Fly  2517 SDLSELAGPWLNLPLMLVSGADEVVKDI------KQQNDELGKRGSIFVEAPRASRRRSFYNFFL 2575
            |.:|.::|        .|:||.....|.      ..:|:|.....|..|:.|             
  Fly  1960 SAISTISG--------AVAGACPPTSDAFSPTFSSTENEEKDGSSSAVVQLP------------- 2003

  Fly  2576 RHQDAVDDSLTSPSVHRKTAMNNTTNTTSNSASTSGTASSTATAPAT-----------GCGPAAT 2629
                           |.:|::..|.::.:.:|:.:||:|.....|.|           |....|.
  Fly  2004 ---------------HSETSIAGTGSSATGAATATGTSSGLGVGPPTVQSTARHVMTVGKRGYAL 2053

  Fly  2630 SASDSDRHQAVGGGSAPSRKRASSFI--RKKPPLERG-LSAQSALRVNKNAFVSEASAPEVIVTR 2691
            :.|||.       ||:..||    |:  ....|.:|. ||.:..|.:.                 
  Fly  2054 NRSDST-------GSSAGRK----FLAPTSSDPQQRSTLSDKERLHIT----------------- 2090

  Fly  2692 PSPEQQTHPHSLSLRPDNATLVHVLVHR-------ESEEYKEEDESS------PSVS-------- 2735
               .||...:|::..|....|..:...|       :|..:..:..|.      |:::        
  Fly  2091 ---SQQRKKNSMTTLPHAGQLGQLAKQRGGGGEATKSSSFFAQLNSEIGQFHYPTINAAAAAAAL 2152

  Fly  2736 ---GNGNGFGVG 2744
               |:|:|.|.|
  Fly  2153 HGYGHGHGHGHG 2164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921 50/256 (20%)
Ion_trans 705..902 CDD:278921 49/212 (23%)
Ion_trans 1768..2019 CDD:278921 78/290 (27%)
Na_channel_gate 2009..2063 CDD:240441 12/54 (22%)
Ion_trans 2085..2320 CDD:278921 69/260 (27%)
GPHH 2331..2386 CDD:293510 11/54 (20%)
naNP_001096981.2 Ion_trans 373..654 CDD:278921 58/414 (14%)
Ion_trans 734..927 CDD:278921 53/217 (24%)
Ion_trans 1240..1497 CDD:278921 78/288 (27%)
Ion_trans 1571..1793 CDD:278921 68/252 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439090
Domainoid 1 1.000 91 1.000 Domainoid score I1740
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
43.870

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