DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and CATSPER4

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_937770.1 Gene:CATSPER4 / 378807 HGNCID:23220 Length:472 Species:Homo sapiens


Alignment Length:287 Identity:76/287 - (26%)
Similarity:120/287 - (41%) Gaps:74/287 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1751 PAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFS-----FCLIFVVEMILKWLALGFS 1810
            |||:..:.:|:..::||     |.|..|..|.:..|.: ||     ...|.:.|::|.||. ||.
Human    92 PAFQLLLALLLVINAIT-----IALRTNSYLDQKHYEL-FSTIDDIVLTILLCEVLLGWLN-GFW 149

  Fly  1811 KYFTSFWTILDFIIVFVSVFSLLIEE------NENLKVLRSLRTLRALRPLRAISRWQGMRIVVN 1869
            .::...|.||:|||||:.:....|.|      |..|:.||.:....|:.||..|         :.
Human   150 IFWKDGWNILNFIIVFILLLRFFINEINIPSINYTLRALRLVHVCMAVEPLARI---------IR 205

  Fly  1870 ALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNYTWI 1934
            .::.::|.:.|::::.|.|.|:||:.||..||....|                            
Human   206 VILQSVPDMANIMVLILFFMLVFSVFGVTLFGAFVPK---------------------------- 242

  Fly  1935 NSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAY-----IYFVIFIVC 1994
                .|.::.:....|....|.:||:::.:|.          |.|...||.     |||.|||..
Human   243 ----HFQNIQVALYTLFICITQDGWVDIYSDF----------QTEKREYAMEIGGAIYFTIFITI 293

  Fly  1995 GSFFTLNLFIGVIIDNFNMLKKKYEGG 2021
            |:|..:|||:.|:..|...:.|..|.|
Human   294 GAFIGINLFVIVVTTNLEQMMKAGEQG 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 68/266 (26%)
Na_channel_gate 2009..2063 CDD:240441 4/13 (31%)
Ion_trans 2085..2320 CDD:278921
GPHH 2331..2386 CDD:293510
CATSPER4NP_937770.1 Ion_trans 91..313 CDD:306908 73/278 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..438
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.