DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and Tpcn2

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_038935131.1 Gene:Tpcn2 / 309139 RGDID:1311779 Length:867 Species:Rattus norvegicus


Alignment Length:789 Identity:142/789 - (17%)
Similarity:272/789 - (34%) Gaps:321/789 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1794 LIFVVEMILKWLALGFSKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAI 1858
            |:|:.::.:|...:|.::...:.|.:..|:::.|||...::..:.|.:  .|||..|.|||...:
  Rat   116 LVFLADLSVKGYLVGQAQLQQNLWLLAYFVVLVVSVVDWIVSLSLNCE--ESLRVRRLLRPFFLL 178

  Fly  1859 SRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDK 1923
            .....|:..:..:.:::|.:.:|.|:..:...:|:::|:..|               .|.|.:: 
  Rat   179 QNSSMMKKTLKCIRWSLPEMASVGLLLTIHLCLFTVIGMLLF---------------TIAEKDE- 227

  Fly  1924 WDCIEQNYTWINSKIT-FDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIY 1987
                .||    ..::| |.::.....:||.:.|.....:||..|        ..|..|  || ::
  Rat   228 ----AQN----KERLTYFRNLPEALTSLLVLLTTSNNPDVMIPA--------YTQNRA--YA-LF 273

  Fly  1988 FVIFIVCGSFFTLNLFIGVIIDNF----------NMLKKK------YE----------------G 2020
            |:||.:.||.|.:||...:|.:.|          ::.:::      ||                |
  Rat   274 FIIFTLIGSLFLMNLLTAIIYNQFRGYLMKSLQTSLFRRRLGARAAYEVLTLQAGPNGTTSELVG 338

  Fly  2021 GVLEMFLTESQKHYYTAMKKLGRKKPQKVIK-------RPI--NHFLAMFYDLS----------- 2065
            ...|.||...||   |.:.|:.:   |.:|:       |||  :.|..:|.::.           
  Rat   339 VNPENFLRVLQK---TQLNKIHK---QAIIQKVHSYEGRPILADEFQKLFDEVDKGIVKERPPKP 397

  Fly  2066 --NSRRFEIAIFV-----------LIFL-NMLTMGI----------------------------- 2087
              .|...:.|.|:           ||.| |:|::.:                             
  Rat   398 QYQSPFLQTAQFIFSHRYFDYLGNLIALGNLLSICVPGAGLKPAAWGTERLCPGDSQLHFHLVLP 462

  Fly  2088 ---------------------------EHYDQPHAVFFI---------LEVSNAFFTTVFGLEAI 2116
                                       :|:......|:.         :|:|:|.....:.|..|
  Rat   463 AGAAVQGVRAGPTGLPVLPQQRVRWPPDHHPAGFGDFYSGRVPIAAPRMELSSAGLPRSWALTTI 527

  Fly  2117 --VKIVGL----------------RYHYFTVPWNVFDFLLVLASIF------------GILMEDI 2151
              .|:.|.                ||     .|.: ..|.||.|:.            |:::..:
  Rat   528 SAFKLWGCSERCGPGCGRCGCDCGRY-----DWQL-GALAVLGSVAMTVLSVAVAVLGGMMVAVV 586

  Fly  2152 M-----------------------------------------IDLPISPTLL------------- 2162
            |                                         :....||.|:             
  Rat   587 MAAWALGMSRVWLGSVSHLLGAFSAWCPYSDYCCLVTPAASSLSPSASPNLVTRLRYLLRKPEQY 651

  Fly  2163 ---------RVVRVFRIGRILRLIKAAKG---IRKLLFALVVSLPALFNIGALLGLITFIYAILG 2215
                     |:|.:..:.|.||:|.:.|.   :...:..|:.:|.|   .|.:|.::.:::|::|
  Rat   652 GPLSLWDMTRLVNILIVIRFLRIIPSIKPTAVVASTILGLIQNLRA---FGGILVVVYYVFAMIG 713

  Fly  2216 MSLF-------GNVKLQ--------GALDDM----VNFQTFGRSMQLLFRLMTSAGWNDVLESLM 2261
            ::||       ||..|.        |:.:.:    .||..|..::..|:.:|....|..:||:  
  Rat   714 INLFRGVIVPPGNSSLVPDNSSAPCGSFEQLGYWPNNFDDFAAALITLWDVMVVNNWQVILEA-- 776

  Fly  2262 IQPPDCDPFIHGHTNGNCGHPLLAITYFTSFIIISYMIVINMYIAIILENF-----NQAHQEEEI 2321
                      :.|.:|.     .::.||..:.::|.:|.||:::|::||||     .|.|::..:
  Rat   777 ----------YKHYSGP-----WSMVYFVLWWLVSSVIWINLFLALLLENFLHRWDPQGHKQLLV 826

  Fly  2322 GIVEDDLEM 2330
            |..:...||
  Rat   827 GTKQITYEM 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 50/241 (21%)
Na_channel_gate 2009..2063 CDD:240441 18/94 (19%)
Ion_trans 2085..2320 CDD:278921 64/419 (15%)
GPHH 2331..2386 CDD:293510 142/789 (18%)
Tpcn2XP_038935131.1 Ion_trans 66..297 CDD:395416 49/217 (23%)
Ion_trans <661..812 CDD:395416 39/170 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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