Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_058943.2 | Gene: | Scn10a / 29571 | RGDID: | 3629 | Length: | 1956 | Species: | Rattus norvegicus |
Alignment Length: | 2624 | Identity: | 830/2624 - (31%) |
---|---|---|---|
Similarity: | 1180/2624 - (44%) | Gaps: | 808/2624 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 EKAVAKHQVVAYTQRSQVKHENRHIQLVREYGFHPRTKASVEDGDVLPRKFEPFPEHMYGKPLEE 75
Fly 76 IDTFI-YEETFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFN 139
Fly 140 CIFLAMTETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIGMEV 204
Fly 205 GNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELR 269
Fly 270 NKCVRQVPTDWTNVSHTDWQIWVNDTDNWLYDEDEL----------------PVLCGNLTGARHC 318
Fly 319 PFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSVSFFTVVVFFG 383
Fly 384 SFYLINLMLAVVALSYEEE-----AEITNEERK-KDLLDHRDDSTFSFDPSVLNVKKLNKNNKKK 442
Fly 443 IDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGDDNKSHSATP-----------SPGPS 496
Fly 497 PRHSATER--------------PSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPM--APTPK--- 542
Fly 543 -GRISFQDSGMGVKNPNMLYPSDYKGQLIANSGQPSSNSSGVNRESSQDDSGVVDDHEEQDTTND 606
Fly 607 MGHVSTVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVHWCTDY 671
Fly 672 ESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECI 736
Fly 737 VKLMALSK-DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLS 800
Fly 801 IIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP-------RWNFNDFFHSFM 858
Fly 859 MIFRILCGEWIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSEELKSKK 923
Fly 924 EEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQAAVGLERG 988
Fly 989 DKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHPL 1053
Fly 1054 PPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYDSREEAT 1118
Fly 1119 YTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRSP 1183
Fly 1184 SYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREELLNCDQKE 1248
Fly 1249 LFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSEFDNIIQSFEKELEEIKRST 1313
Fly 1314 TSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYDSYDLSSVPRRSQSV 1378
Fly 1379 SAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAVAATSASQAQPNQSP 1443
Fly 1444 FLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLRLDSLSLKS 1508
Fly 1509 TNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIE-PPTLAQISSLKTTPPLAALTEHQQHFHAT 1572
Fly 1573 SIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAADASSALALAM 1637
Fly 1638 AQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGATKA 1702
Fly 1703 AKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKH-WT---RVRTAVLTVVDTPAFEWFVLVLIFA 1763
Fly 1764 SSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFSKYFTSFWTILDFIIVFVS 1828
Fly 1829 VFSLL--IEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLI 1891
Fly 1892 FSIMGVQFFGGKFFKCV---NEMGELLPITEVNDKWDCIEQNYT----WINSKITFDHVGMGYLA 1949
Fly 1950 LLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNML 2014
Fly 2015 KKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLAMFYDLSNSRRFEIAIFVLIF 2079
Fly 2080 LNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHYFTVPWNVFDFLLVLASIF 2144
Fly 2145 GILMEDIMIDLP--ISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLI 2207
Fly 2208 TFIYAILGMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLM-IQPPDCDPFI 2271
Fly 2272 --HGHTNGNCGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIR 2334
Fly 2335 WSKYDPHATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVL 2399
Fly 2400 GHVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRK----- 2459
Fly 2460 ------REKE-------------RSNSG-----DSATQTSSPGGWQSKLSALNFFHLQVSRRGTA 2500
Fly 2501 CSSRASSRKSSRASDASDLSELAG 2524 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 110/234 (47%) |
Ion_trans | 705..902 | CDD:278921 | 98/204 (48%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 150/259 (58%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 30/53 (57%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 126/239 (53%) | ||
GPHH | 2331..2386 | CDD:293510 | 29/54 (54%) | ||
Scn10a | NP_058943.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 31..54 | 6/30 (20%) | |
I. /evidence=ECO:0000305 | 116..404 | 139/307 (45%) | |||
Ion_trans | 129..406 | CDD:395416 | 137/296 (46%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 441..484 | 14/51 (27%) | |||
Na_trans_cytopl | <482..614 | CDD:403218 | 23/148 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 537..581 | 8/43 (19%) | |||
II. /evidence=ECO:0000305 | 646..910 | 131/285 (46%) | |||
Ion_trans | 663..893 | CDD:395416 | 122/235 (52%) | ||
Na_trans_assoc | 903..1148 | CDD:399489 | 88/825 (11%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1008..1094 | 33/296 (11%) | |||
III. /evidence=ECO:0000305 | 1141..1450 | 170/310 (55%) | |||
Ion_trans | 1152..1428 | CDD:395416 | 154/275 (56%) | ||
Na_channel_gate | 1420..1472 | CDD:240441 | 30/53 (57%) | ||
IV. /evidence=ECO:0000305 | 1459..1758 | 152/298 (51%) | |||
Ion_trans | 1476..1733 | CDD:395416 | 135/256 (53%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1906..1956 | 12/59 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.820 |