Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006233631.1 | Gene: | Cacna1b / 257648 | RGDID: | 628852 | Length: | 2359 | Species: | Rattus norvegicus |
Alignment Length: | 3057 | Identity: | 664/3057 - (21%) |
---|---|---|---|
Similarity: | 1099/3057 - (35%) | Gaps: | 1014/3057 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 IYEETFCVVSKRFRKNYIHR--------FTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATI 136
Fly 137 LFNCIFLA------------MTETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLD 189
Fly 190 FVVITSG-YATIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCL 253
Fly 254 MVFALFALQVYMGELRNKCVRQVPTDWTNVSHTDWQIWVNDTDNWLYDEDELPVLCGNLTGARHC 318
Fly 319 PFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENV-YNMVLATCGPMSVSFFTVVVFF 382
Fly 383 GSFYLINLMLAVVALSYEEEAEITNEERKKDLLDHRDDSTFSFDPSVLNVKKLNKNNKKKIDSRK 447
Fly 448 GVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGDDNKSHSATPSPGPSPRHSATERPSALTMQA 512
Fly 513 QKQYQQMEQQHKLAKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPNMLYPSDYKGQLIANSGQP- 576
Fly 577 --SSNSSGVNRESSQDDSGVVDDHEEQDTTNDMGHVSTVELALSPREVRLIKCNGNIARIKNHNV 639
Fly 640 YALHQEFSSEVVVIDDLPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAF 704
Fly 705 LAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMALS-KDFFLCGWNIFDLLIVTASLLDIIF 768
Fly 769 ELVD-----GLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGM 828
Fly 829 QLFSKDYTPEKFDPDPVPRWNFNDFFHSFMMIFRILCGE-WIEPLWDCMRAE--EEQGASTCFAI 890
Fly 891 FLPTLVMGNFMVLNLFLALLL-NSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRK 954
Fly 955 ERKFAEKFQQIVLDAQQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGF 1019
Fly 1020 QIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGT 1084
Fly 1085 CQNLTPFVQ---AERRLQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCG 1146
Fly 1147 SFNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEM 1211
Fly 1212 RRHSSGQSLNSMSIEQDELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRR 1276
Fly 1277 PSSQMGQPENETMVEHSEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEAT---KAIM 1338
Fly 1339 EHIAIITGASERSAADEVVLPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDED 1403
Fly 1404 FSISNEIRKICDQIHAPFVAMEAMAVAA-----------------TSASQAQPNQSPFLR----R 1447
Fly 1448 KVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLR--LDSLSLKSTN 1510
Fly 1511 SYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPLAALTEHQQHFHATSIQ 1575
Fly 1576 AAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAADASSALALAMAQK 1640
Fly 1641 TEQSQSTAP--DATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGATKAA 1703
Fly 1704 KVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLVLIFASSITL 1768
Fly 1769 CFED-INLD--KNKTLKRVLYWINFSFCLIFVVEMILKWLALGF----SKYFTSFWTILDFIIV- 1825
Fly 1826 ---FVSVFSLLI--EENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVC 1885
Fly 1886 LVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDC-----------IE-QNYTWINSKI 1938
Fly 1939 TFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQP----QREANLYAYIYFVIFIVCGSFFT 1999
Fly 2000 LNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQK---HYYTAMKKLGRKKPQKVIKRPINHFLAMF 2061
Fly 2062 YDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLR-YH 2125
Fly 2126 YFTVPWNVFDFLLVLASIFGILMEDI-----MIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRK 2185
Fly 2186 LLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNVKLQGALDDMV------NFQTFGRSMQLL 2244
Fly 2245 FRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGN-CGHPLLAITYFTSFIIISYMIVINMYIAII 2308
Fly 2309 LENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPLGISK--PNNVA 2371
Fly 2372 ---LVSFNLPISKGN-KIHCLDILHALVKHVLGHVEETDNFKQLQEQMDVKFKKQFPT------R 2426
Fly 2427 KELEIVSSTRIWKRQEKAAKTIQTG---WKEYLRRKREKERSNSGDSATQTSSPGGWQSKLSALN 2488
Fly 2489 FFH-LQVSRRGTACSSRASSRKSSRASDASDLSELAGPWLNLPLMLVSGADEVVKDIKQQNDE-- 2550
Fly 2551 ----------------LGKRGSIFVEAPRASRRRSFYNFFLRHQDAVDDSLTSPSVHRKTAMNNT 2599
Fly 2600 TNTTSNSASTSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRASSFIRKKPPLERG 2664
Fly 2665 LSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSLSLRPDNATLVHVLVHRESEEYKEEDE 2729
Fly 2730 SSPSVS-----------GNGNGFGVG---------------------------------LDMLSK 2750
Fly 2751 QPPPQIRIT--------------------TGSVESS--MDTCAMPTVQIMVDSPKDPPRGDFSSA 2793
Fly 2794 PIDDVGAPIDVNVQ-GDTSQVFYDYNPEKATDDQGNGQDETAQFESLPDR-----------QRXP 2846
Fly 2847 PVNTPLRDSEKRSS---RGSRSSSS-----------------STSSIRSCSSSSSSSAASAAAPS 2891
Fly 2892 AR 2893 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 77/220 (35%) |
Ion_trans | 705..902 | CDD:278921 | 56/205 (27%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 85/279 (30%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 9/56 (16%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 87/247 (35%) | ||
GPHH | 2331..2386 | CDD:293510 | 21/60 (35%) | ||
Cacna1b | XP_006233631.1 | Ion_trans | 112..367 | CDD:278921 | 91/279 (33%) |
Ion_trans | 500..721 | CDD:278921 | 65/225 (29%) | ||
Ion_trans | 1186..1448 | CDD:278921 | 85/280 (30%) | ||
Ion_trans | 1511..1742 | CDD:278921 | 87/247 (35%) | ||
GPHH | 1750..1814 | CDD:293510 | 21/63 (33%) | ||
Ca_chan_IQ | 1816..1890 | CDD:285917 | 14/77 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |