DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and Cacna1i

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_006521012.1 Gene:Cacna1i / 239556 MGIID:2178051 Length:2226 Species:Mus musculus


Alignment Length:3022 Identity:649/3022 - (21%)
Similarity:1033/3022 - (34%) Gaps:1136/3022 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SPARRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEAE--------------YIFLAIYSIE 163
            || |..|:.:..|.:|:...|..||.||:.|.|.:..::.|              :||: .:::|
Mouse    65 SP-RNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMECLSDRCKILQVFDDFIFI-FFAME 127

  Fly   164 MVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIGMEVG--NLAGLRTFRVLRALKTVSIMP 226
            ||:|::|.| :..|..||.:.||.|||.::.:|.....:::.  ||:.:||.||||.||.::.:|
Mouse   128 MVLKMVALG-IFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVP 191

  Fly   227 GLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQVPTDWTNVSHTDWQIW 291
            .::.::|.||.:...|..|:.|..|...:|.:..:|::.|.|||:|..:                
Mouse   192 SMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLE---------------- 240

  Fly   292 VNDTDNWLY-------------DEDELPVLCGNLTG----------------ARHC--------- 318
                :|:..             ::||:|.:| :|:|                .|.|         
Mouse   241 ----ENFTIQGDVALPPYYQPEEDDEMPFIC-SLSGDNGIMGCHEIPPLKEQGRECCLSKDDMYD 300

  Fly   319 ------------------PFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVL 365
                              .:..||.....||:.|..||||..::.:..||:|||:.|..:...|:
Mouse   301 FGAGRQDLNASGLCVNWNRYYNVCRTGNANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVM 365

  Fly   366 ATCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNEERKKDLLDHR----DDSTFS-- 424
            ......:..:|.:::..|||::|||.|.|:|..:.|    |.:...:.:|:.|    ..||.:  
Mouse   366 DAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSE----TKQREHRLMLEQRQRYLSSSTVASY 426

  Fly   425 ------FDPSVLNVKKLNKNNKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGD- 482
                  ::.....|..:.:..|::       .|..|...:.||:.|..|.........:..... 
Mouse   427 AEPGDCYEEIFQYVCHILRKAKRR-------ALGLYQALQNRRQATGPGTPAPAKPGPHAKEPSH 484

  Fly   483 ----------DNKSH----------SATPSPGPSPRHSATERPSAL--TMQAQKQYQQMEQQHKL 525
                      |...|          ::.||..|..:|.|..|||.|  |...|:           
Mouse   485 CKLCPRHSPLDTTPHTLVQPISAILASDPSSCPRCQHEAGRRPSGLGSTDSGQE----------- 538

  Fly   526 AKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPNMLYPSDYKGQLIANSGQPSSNSSGVNRESSQD 590
             .||||||                                 .:..||...|.|:..||:      
Mouse   539 -GSGSGGS---------------------------------AEAEANGDGPQSSEDGVS------ 563

  Fly   591 DSGVVDDHEEQDTTNDMGHVSTVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDD 655
             ||:..:.|::|                           ..||:                     
Mouse   564 -SGLGKEEEQED---------------------------GAARL--------------------- 579

  Fly   656 LPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNAL 720
                        |.|.  |.:.:..|..:|....|...|.:.|::||..:.:|||...|...|.|
Mouse   580 ------------CGDV--WRETRAKLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEELTNIL 630

  Fly   721 DVGNKVFTSIFTFECIVKLMALSK-DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLR 784
            ::.|.||||:|..|.|:||.|... |:....:||||.:||..|:.:|:.:...||||||..||||
Mouse   631 EICNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIVGQADGGLSVLRTFRLLR 695

  Fly   785 VLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP-RW 848
            ||||.:....::..|.:::.|:..:....::|::.|:||:::||.:|...::......|.|| |.
Mouse   696 VLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRK 760

  Fly   849 NFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEEEQGAST---CFAIFLPTLVMGNFMVLNLFLAL 909
            ||:....:.:.:|:||..| |...|::.|       |||   ....|:..:..||:::.||.:|:
Mouse   761 NFDSLLWAIVTVFQILTQEDWNVVLYNGM-------ASTTPWASLYFVALMTFGNYVLFNLLVAI 818

  Fly   910 LLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHA 974
            |:..|.:|.                                                 ||.::::
Mouse   819 LVEGFQAEG-------------------------------------------------DANRSYS 834

  Fly   975 QTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDT 1039
            .  ..|::..||..||                                |.:||         |.:
Mouse   835 D--EDQSSSNLEELDK--------------------------------LPEGL---------DSS 856

  Fly  1040 GDLPEQIQLQAHPLPPTSD-----SMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQ 1099
            .|      |:..|:|.|.:     |:|          .||........|....|           
Mouse   857 RD------LKLCPIPMTPNGHLDPSLP----------LGGHLGPAGAMGAAPRL----------- 894

  Fly  1100 HQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGS 1164
                                           |...||                            
Mouse   895 -------------------------------SLQPDP---------------------------- 900

  Fly  1165 EEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDE 1229
                                                  :|.:.|:   |.||..||..||.:|..
Mouse   901 --------------------------------------VLVALES---RKSSVMSLGRMSYDQRS 924

  Fly  1230 LLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSE 1294
            |.|.:                                           ||..| |..        
Mouse   925 LSSSR-------------------------------------------SSYYG-PWG-------- 937

  Fly  1295 FDNIIQSFEKELEEIKRSTTSLERKLS--NLSEPSPAADEATKAIMEHIAIITGASERSAADEVV 1357
                            ||.|...|:.|  :|....|:|        ||.::::|  ||..     
Mouse   938 ----------------RSGTWASRRSSWNSLKHKPPSA--------EHESLLSG--ERGG----- 971

  Fly  1358 LPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFV 1422
                       |.|                    |:.|..|   ||                   
Mouse   972 -----------SCV--------------------RACEGAR---ED------------------- 983

  Fly  1423 AMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEK 1487
                          |.|..:|                                            
Mouse   984 --------------APPRAAP-------------------------------------------- 990

  Fly  1488 MPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISS 1552
                 ||.|                                                        
Mouse   991 -----LHAP-------------------------------------------------------- 994

  Fly  1553 LKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSA 1617
                        |..|.|     ..|..||.|.|          .||.:     :||...|...|
Mouse   995 ------------HTHHAH-----HGPHLAHRHRH----------HRRTL-----SLDTRDSVDLA 1027

  Fly  1618 R----TESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTV 1678
            .    ..:||..|..|:     ..|...|......|:..:  ..||::            ||   
Mouse  1028 ELVPVVGAHSRAAWRAA-----GQAPGHEDCNGRMPNIAK--DVFTKM------------DD--- 1070

  Fly  1679 GGRRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTA 1743
               |..:|...:.:.:..  ..:..|:.|...|..|    ..|..|.:.....::     :.|..
Mouse  1071 ---RRDRGEDEEEIDYTL--CFRVRKMIDVYKPDWC----EVREDWSVYLFSPEN-----KFRIL 1121

  Fly  1744 VLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALG 1808
            ..|::....|::.||..||.:.||:..|...::...|.:..|...|:.|..|||.||.||.::||
Mouse  1122 CQTIIAHKLFDYVVLAFIFLNCITIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKVVSLG 1186

  Fly  1809 F----SKYFTSFWTILDFIIVFVSVFSLLIE-----ENENLKVLRSLRTLRALRPLRAISRWQGM 1864
            .    ..|..|.|.:||..:||||:..:::.     ..:.|.|||.||.||.|||||.|||..|:
Mouse  1187 LYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGL 1251

  Fly  1865 RIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQ 1929
            ::||..|:.::..|.|::|:|..|::||.|:|||.|.|||:.|:.     :....:.::.||:..
Mouse  1252 KLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLG-----VDTRNITNRSDCVAA 1311

  Fly  1930 NYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVC 1994
            ||.|::.|..||::|...::|..:|:.:||:.:|.:.:||..||.||....|.:..:||:.|::.
Mouse  1312 NYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLI 1376

  Fly  1995 GSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLA 2059
            .|||.||:|:||:::||:..::..|.       .|:::.....:::| .||.:|..:.|   :.|
Mouse  1377 VSFFVLNMFVGVVVENFHKCRQHQEA-------EEARRREEKRLRRL-EKKRRKAQRLP---YYA 1430

  Fly  2060 -------MFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIV 2117
                   :.:.:..|...:|.|..:|.||::||.:|||:||.::...|:..|..|||||.|||::
Mouse  1431 TYCPTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVL 1495

  Fly  2118 KIV--GLRYHYFTVPWNVFDFLLVLASIFGILMEDIMID--LPISPTLLRVVRVFRIGRILRLIK 2178
            |:|  ||| .:|...||..|..:||.|:.||.:|:|.|:  |||:||::|::||.||.|:|:|:|
Mouse  1496 KLVAFGLR-RFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLK 1559

  Fly  2179 AAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNVKLQG-----ALDDMVNFQTFG 2238
            .|.|:|.||..:|.:||.:.|:|.|..|:.||||.||:.|||.:....     .:.....|:.||
Mouse  1560 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFG 1624

  Fly  2239 RSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGNCGHPLLAIT--YFTSFIIISYMIVI 2301
            .:...||::.|...||.:::..:   .||.     |...:|...|..::  ||.||::.:..::|
Mouse  1625 MAFLTLFQVSTGDNWNGIMKDTL---RDCT-----HDERSCLSSLQFVSPLYFVSFVLTAQFVLI 1681

  Fly  2302 NMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLD------- 2359
            |:.:|:::::.:.:::|     .::|.||                      |....|:       
Mouse  1682 NVVVAVLMKHLDDSNKE-----AQEDAEM----------------------DAEIELEMAHGLGP 1719

  Fly  2360 -------------------PPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVEET 2405
                               |.:..|.|......|....:....:.|       |.:|.....:||
Mouse  1720 GPGPCPCPCPCPCPCPCPGPRMPTSSPGAPGRGSGGAGVGGDTESH-------LCRHCYSPAQET 1777

  Fly  2406 DNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKERSNSGDS 2470
                                   |.:.|.:.|.|...:...||..              :.||..
Mouse  1778 -----------------------LWLDSVSLIIKDSLEGELTIID--------------NLSGSI 1805

  Fly  2471 ATQTSSPGGW-----------------------------------QSKLSALNFFHLQVSRRG-- 2498
            ....|||.|.                                   |.:|:....|.|...|..  
Mouse  1806 FHHYSSPAGCDKCHHDKQEGPVAQRSRPRLPHPSPRVTRGHHLPPQVQLAETEAFSLNSDRSSSV 1870

  Fly  2499 -----------TACSSRASSRKSS----RASDASDLSELAGPWLNLP-------LMLVSGA---D 2538
                       |||.......|..    ....|.||.|...|:...|       |:...||   :
Mouse  1871 LLGDDLSLEDPTACPQGPKESKGELEPPEPMQAGDLDECFFPFAGEPVSAGPESLLCEMGAIPFN 1935

  Fly  2539 EVVKDIKQQNDE--------------LGKRGSIFVEAPRASRR--------RSFYNFFLRHQDAV 2581
            .|...:|.::::              |......|..|..||::        .:.....|:...| 
Mouse  1936 PVQSWLKHESNQAPPSPFSPDGSSPLLQMPAEFFHPAVSASQKGQEPGMSSGTLPKIALQGSWA- 1999

  Fly  2582 DDSLTSPSVHRKTAMNNTTNTTSNSASTSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAP 2646
              ||.||||:.......|.:.||..||.|.:|.|..|....     :.:.|||.| :|:|.....
Mouse  2000 --SLRSPSVNCTLLRQATVSDTSLDASPSSSAGSLQTTLED-----SLTLSDSPR-RALGPPVQV 2056

  Fly  2647 SRKRA--SSFIRKKPPLE-RGLSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSLSLRPD 2708
            ...||  |...|::..|. |||.:...||.::.:..|..|      |.|.   .|:..|:     
Mouse  2057 PGPRASLSPATRRRLSLRGRGLFSLRGLRAHQRSHSSGGS------TSPG---CTYHDSM----- 2107

  Fly  2709 NATLVHVLVHRESEEYKEEDESSPSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMDTCAMP 2773
                               |.|.....|...|.|.|.:...         |..|:..:...|..|
Mouse  2108 -------------------DPSDEEGRGGAGGGGAGSEHSE---------TLSSLSLTSLFCLPP 2144

  Fly  2774 TVQIMVDSPKDPPRG-----DFSS------APIDDVGAP-IDVNVQGDTSQVFYDYNPEKATDDQ 2826
            |:         ||.|     .|||      .|    |.| ..|:|:|.....  .:..:::.|..
Mouse  2145 TL---------PPPGLTPARKFSSTSSLAAGP----GRPGATVSVRGLARSP--SWAADRSKDPP 2194

  Fly  2827 GNGQDETAQFESLPDRQRXPPVNTPLRDSEKR 2858
            |..|..:....|.|:.|. |..:|......||
Mouse  2195 GQAQLASGFGSSAPEPQPPPGESTDAASKRKR 2226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921 68/290 (23%)
Ion_trans 705..902 CDD:278921 68/202 (34%)
Ion_trans 1768..2019 CDD:278921 93/259 (36%)
Na_channel_gate 2009..2063 CDD:240441 10/60 (17%)
Ion_trans 2085..2320 CDD:278921 89/245 (36%)
GPHH 2331..2386 CDD:293510 6/80 (8%)
Cacna1iXP_006521012.1 Ion_trans 76..407 CDD:366146 89/357 (25%)
Ion_trans 597..824 CDD:366146 77/233 (33%)
Ion_trans 1128..1400 CDD:366146 100/276 (36%)
Ion_trans 1445..1700 CDD:366146 96/268 (36%)
PHA03307 1867..>2226 CDD:223039 90/424 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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