DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and Cacna1i

DIOPT Version :10

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_006521012.1 Gene:Cacna1i / 239556 MGIID:2178051 Length:2226 Species:Mus musculus


Alignment Length:3022 Identity:650/3022 - (21%)
Similarity:1034/3022 - (34%) Gaps:1136/3022 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SPARRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEAE--------------YIFLAIYSIE 163
            || |..|:.:..|.:|:...|..||.||:.|.|.:..::.|              :||: .:::|
Mouse    65 SP-RNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMECLSDRCKILQVFDDFIFI-FFAME 127

  Fly   164 MVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIGMEVG--NLAGLRTFRVLRALKTVSIMP 226
            ||:|::|.| :..|..||.:.||.|||.::.:|.....:::.  ||:.:||.||||.||.::.:|
Mouse   128 MVLKMVALG-IFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVP 191

  Fly   227 GLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQVPTDWTNVSHTDWQIW 291
            .::.::|.||.:...|..|:.|..|...:|.:..:|::.|.|||:|..:                
Mouse   192 SMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLE---------------- 240

  Fly   292 VNDTDNWLY-------------DEDELPVLCGNLTG----------------ARHC--------- 318
                :|:..             ::||:|.:| :|:|                .|.|         
Mouse   241 ----ENFTIQGDVALPPYYQPEEDDEMPFIC-SLSGDNGIMGCHEIPPLKEQGRECCLSKDDMYD 300

  Fly   319 ------------------PFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVL 365
                              .:..||.....||:.|..||||..::.:..||:|||:.|..:...|:
Mouse   301 FGAGRQDLNASGLCVNWNRYYNVCRTGNANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVM 365

  Fly   366 ATCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEE----EAEITNEERKKDLLDHRDDSTFS-- 424
            ......:..:|.:::..|||::|||.|.|:|..:.|    |..:..|:|::.|    ..||.:  
Mouse   366 DAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYL----SSSTVASY 426

  Fly   425 ------FDPSVLNVKKLNKNNKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGD- 482
                  ::.....|..:.:..|::       .|..|...:.||:.|..|.........:..... 
Mouse   427 AEPGDCYEEIFQYVCHILRKAKRR-------ALGLYQALQNRRQATGPGTPAPAKPGPHAKEPSH 484

  Fly   483 ----------DNKSH----------SATPSPGPSPRHSATERPSAL--TMQAQKQYQQMEQQHKL 525
                      |...|          ::.||..|..:|.|..|||.|  |...|:           
Mouse   485 CKLCPRHSPLDTTPHTLVQPISAILASDPSSCPRCQHEAGRRPSGLGSTDSGQE----------- 538

  Fly   526 AKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPNMLYPSDYKGQLIANSGQPSSNSSGVNRESSQD 590
             .||||||                                 .:..||...|.|:..||:      
Mouse   539 -GSGSGGS---------------------------------AEAEANGDGPQSSEDGVS------ 563

  Fly   591 DSGVVDDHEEQDTTNDMGHVSTVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDD 655
             ||:..:.|::|                           ..||:                     
Mouse   564 -SGLGKEEEQED---------------------------GAARL--------------------- 579

  Fly   656 LPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNAL 720
                        |.|.  |.:.:..|..:|....|...|.:.|::||..:.:|||...|...|.|
Mouse   580 ------------CGDV--WRETRAKLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEELTNIL 630

  Fly   721 DVGNKVFTSIFTFECIVKLMALSK-DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLR 784
            ::.|.||||:|..|.|:||.|... |:....:||||.:||..|:.:|:.:...||||||..||||
Mouse   631 EICNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIVGQADGGLSVLRTFRLLR 695

  Fly   785 VLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP-RW 848
            ||||.:....::..|.:::.|:..:....::|::.|:||:::||.:|...::......|.|| |.
Mouse   696 VLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRK 760

  Fly   849 NFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEEEQGAST---CFAIFLPTLVMGNFMVLNLFLAL 909
            ||:....:.:.:|:||..| |...|::.|       |||   ....|:..:..||:::.||.:|:
Mouse   761 NFDSLLWAIVTVFQILTQEDWNVVLYNGM-------ASTTPWASLYFVALMTFGNYVLFNLLVAI 818

  Fly   910 LLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHA 974
            |:..|.:|.                                                 ||.::::
Mouse   819 LVEGFQAEG-------------------------------------------------DANRSYS 834

  Fly   975 QTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDT 1039
            .  ..|::..||..||                                |.:||         |.:
Mouse   835 D--EDQSSSNLEELDK--------------------------------LPEGL---------DSS 856

  Fly  1040 GDLPEQIQLQAHPLPPTSD-----SMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQ 1099
            .|      |:..|:|.|.:     |:|          .||........|....|           
Mouse   857 RD------LKLCPIPMTPNGHLDPSLP----------LGGHLGPAGAMGAAPRL----------- 894

  Fly  1100 HQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGS 1164
                                           |...||                            
Mouse   895 -------------------------------SLQPDP---------------------------- 900

  Fly  1165 EEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDE 1229
                                                  :|.:.|:   |.||..||..||.:|..
Mouse   901 --------------------------------------VLVALES---RKSSVMSLGRMSYDQRS 924

  Fly  1230 LLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSE 1294
            |.|.:                                           ||..| |..        
Mouse   925 LSSSR-------------------------------------------SSYYG-PWG-------- 937

  Fly  1295 FDNIIQSFEKELEEIKRSTTSLERKLS--NLSEPSPAADEATKAIMEHIAIITGASERSAADEVV 1357
                            ||.|...|:.|  :|....|:|        ||.::::|  ||..     
Mouse   938 ----------------RSGTWASRRSSWNSLKHKPPSA--------EHESLLSG--ERGG----- 971

  Fly  1358 LPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFV 1422
                       |.|                    |:.|..|   ||                   
Mouse   972 -----------SCV--------------------RACEGAR---ED------------------- 983

  Fly  1423 AMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEK 1487
                          |.|..:|                                            
Mouse   984 --------------APPRAAP-------------------------------------------- 990

  Fly  1488 MPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISS 1552
                 ||.|                                                        
Mouse   991 -----LHAP-------------------------------------------------------- 994

  Fly  1553 LKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSA 1617
                        |..|.|     ..|..||.|.|          .||.:     :||...|...|
Mouse   995 ------------HTHHAH-----HGPHLAHRHRH----------HRRTL-----SLDTRDSVDLA 1027

  Fly  1618 R----TESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTV 1678
            .    ..:||..|..|:     ..|...|......|:..:  ..||::            ||   
Mouse  1028 ELVPVVGAHSRAAWRAA-----GQAPGHEDCNGRMPNIAK--DVFTKM------------DD--- 1070

  Fly  1679 GGRRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTA 1743
               |..:|...:.:.:..  ..:..|:.|...|..|    ..|..|.:.....::     :.|..
Mouse  1071 ---RRDRGEDEEEIDYTL--CFRVRKMIDVYKPDWC----EVREDWSVYLFSPEN-----KFRIL 1121

  Fly  1744 VLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALG 1808
            ..|::....|::.||..||.:.||:..|...::...|.:..|...|:.|..|||.||.||.::||
Mouse  1122 CQTIIAHKLFDYVVLAFIFLNCITIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKVVSLG 1186

  Fly  1809 F----SKYFTSFWTILDFIIVFVSVFSLLIE-----ENENLKVLRSLRTLRALRPLRAISRWQGM 1864
            .    ..|..|.|.:||..:||||:..:::.     ..:.|.|||.||.||.|||||.|||..|:
Mouse  1187 LYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGL 1251

  Fly  1865 RIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQ 1929
            ::||..|:.::..|.|::|:|..|::||.|:|||.|.|||:.|:.     :....:.::.||:..
Mouse  1252 KLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLG-----VDTRNITNRSDCVAA 1311

  Fly  1930 NYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVC 1994
            ||.|::.|..||::|...::|..:|:.:||:.:|.:.:||..||.||....|.:..:||:.|::.
Mouse  1312 NYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLI 1376

  Fly  1995 GSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLA 2059
            .|||.||:|:||:::||:..::..|.       .|:::.....:::| .||.:|..:.|   :.|
Mouse  1377 VSFFVLNMFVGVVVENFHKCRQHQEA-------EEARRREEKRLRRL-EKKRRKAQRLP---YYA 1430

  Fly  2060 -------MFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIV 2117
                   :.:.:..|...:|.|..:|.||::||.:|||:||.::...|:..|..|||||.|||::
Mouse  1431 TYCPTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVL 1495

  Fly  2118 KIV--GLRYHYFTVPWNVFDFLLVLASIFGILMEDIMID--LPISPTLLRVVRVFRIGRILRLIK 2178
            |:|  ||| .:|...||..|..:||.|:.||.:|:|.|:  |||:||::|::||.||.|:|:|:|
Mouse  1496 KLVAFGLR-RFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLK 1559

  Fly  2179 AAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNVKLQG-----ALDDMVNFQTFG 2238
            .|.|:|.||..:|.:||.:.|:|.|..|:.||||.||:.|||.:....     .:.....|:.||
Mouse  1560 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFG 1624

  Fly  2239 RSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGNCGHPLLAIT--YFTSFIIISYMIVI 2301
            .:...||::.|...||.:::..:   .||.     |...:|...|..::  ||.||::.:..::|
Mouse  1625 MAFLTLFQVSTGDNWNGIMKDTL---RDCT-----HDERSCLSSLQFVSPLYFVSFVLTAQFVLI 1681

  Fly  2302 NMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLD------- 2359
            |:.:|:::::.:.:::|     .::|.||                      |....|:       
Mouse  1682 NVVVAVLMKHLDDSNKE-----AQEDAEM----------------------DAEIELEMAHGLGP 1719

  Fly  2360 -------------------PPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVEET 2405
                               |.:..|.|......|....:....:.|       |.:|.....:||
Mouse  1720 GPGPCPCPCPCPCPCPCPGPRMPTSSPGAPGRGSGGAGVGGDTESH-------LCRHCYSPAQET 1777

  Fly  2406 DNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKERSNSGDS 2470
                                   |.:.|.:.|.|...:...||..              :.||..
Mouse  1778 -----------------------LWLDSVSLIIKDSLEGELTIID--------------NLSGSI 1805

  Fly  2471 ATQTSSPGGW-----------------------------------QSKLSALNFFHLQVSRRG-- 2498
            ....|||.|.                                   |.:|:....|.|...|..  
Mouse  1806 FHHYSSPAGCDKCHHDKQEGPVAQRSRPRLPHPSPRVTRGHHLPPQVQLAETEAFSLNSDRSSSV 1870

  Fly  2499 -----------TACSSRASSRKSS----RASDASDLSELAGPWLNLP-------LMLVSGA---D 2538
                       |||.......|..    ....|.||.|...|:...|       |:...||   :
Mouse  1871 LLGDDLSLEDPTACPQGPKESKGELEPPEPMQAGDLDECFFPFAGEPVSAGPESLLCEMGAIPFN 1935

  Fly  2539 EVVKDIKQQNDE--------------LGKRGSIFVEAPRASRR--------RSFYNFFLRHQDAV 2581
            .|...:|.::::              |......|..|..||::        .:.....|:...| 
Mouse  1936 PVQSWLKHESNQAPPSPFSPDGSSPLLQMPAEFFHPAVSASQKGQEPGMSSGTLPKIALQGSWA- 1999

  Fly  2582 DDSLTSPSVHRKTAMNNTTNTTSNSASTSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAP 2646
              ||.||||:.......|.:.||..||.|.:|.|..|....     :.:.|||.| :|:|.....
Mouse  2000 --SLRSPSVNCTLLRQATVSDTSLDASPSSSAGSLQTTLED-----SLTLSDSPR-RALGPPVQV 2056

  Fly  2647 SRKRA--SSFIRKKPPLE-RGLSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSLSLRPD 2708
            ...||  |...|::..|. |||.:...||.::.:..|..|      |.|.   .|:..|:     
Mouse  2057 PGPRASLSPATRRRLSLRGRGLFSLRGLRAHQRSHSSGGS------TSPG---CTYHDSM----- 2107

  Fly  2709 NATLVHVLVHRESEEYKEEDESSPSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMDTCAMP 2773
                               |.|.....|...|.|.|.:...         |..|:..:...|..|
Mouse  2108 -------------------DPSDEEGRGGAGGGGAGSEHSE---------TLSSLSLTSLFCLPP 2144

  Fly  2774 TVQIMVDSPKDPPRG-----DFSS------APIDDVGAP-IDVNVQGDTSQVFYDYNPEKATDDQ 2826
            |:         ||.|     .|||      .|    |.| ..|:|:|.....  .:..:::.|..
Mouse  2145 TL---------PPPGLTPARKFSSTSSLAAGP----GRPGATVSVRGLARSP--SWAADRSKDPP 2194

  Fly  2827 GNGQDETAQFESLPDRQRXPPVNTPLRDSEKR 2858
            |..|..:....|.|:.|..|..:|......||
Mouse  2195 GQAQLASGFGSSAPEPQPPPGESTDAASKRKR 2226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 125..371 CDD:459842 77/317 (24%)
Ion_trans 687..902 CDD:459842 73/220 (33%)
Ion_trans 1751..2019 CDD:459842 100/276 (36%)
Na_channel_gate 2009..2063 CDD:240441 10/60 (17%)
Ion_trans 2067..2320 CDD:459842 96/263 (37%)
GPHH 2332..2378 CDD:465306 6/71 (8%)
Cacna1iXP_006521012.1 Ion_trans 76..407 CDD:459842 88/353 (25%)
Ion_trans 597..824 CDD:459842 77/233 (33%)
Ion_trans 1128..1400 CDD:459842 100/276 (36%)
Ion_trans 1445..1700 CDD:459842 96/268 (36%)
PHA03307 1867..>2226 CDD:223039 90/424 (21%)

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