DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and Catsper2

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_694715.2 Gene:Catsper2 / 212670 MGIID:2387404 Length:588 Species:Mus musculus


Alignment Length:323 Identity:80/323 - (24%)
Similarity:152/323 - (47%) Gaps:69/323 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1747 VVDTPAFEWFVLVLIFASSITLCFEDINLDKNKT----LKRVLYWINFSFCLIFVVEMILKWLAL 1807
            |:|:..|..|::.|||.::..|..|...::...|    :|..|...::...|.|:||::|.||| 
Mouse   102 VLDSSVFSKFIISLIFLNTFVLMVEIELMESTNTALWPVKLALEVADWFILLSFIVEILLMWLA- 165

  Fly  1808 GFSKYFTSFWTILDFIIVFVSVFSLLIEENENLKV------LRSLRTLRALRPLRAISRWQGMRI 1866
            .||.::...|.:.||   ||::.|||.|....|.|      |:.||..|.||.|:..:|::.:::
Mouse   166 SFSLFWKDAWNVFDF---FVTLLSLLPELVVLLGVPAHSVWLQLLRVCRVLRSLKLFARFRQIKV 227

  Fly  1867 VVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNY 1931
            ::.||:.|:.|:..:|::.|:|:.||::.||.|| .::.:...|               .:|.|.
Mouse   228 ILLALVRALKSMTFLLMLLLIFFYIFAVTGVYFF-REYSRSTIE---------------GLEYNM 276

  Fly  1932 TW---INSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIV 1993
            .:   :||.:|          :..:.|.:.|..|:.|.       .:....:.:::.||.:::::
Mouse   277 FFSDLLNSLVT----------VFILFTLDHWYAVLQDI-------WKVPESSRVFSSIYVILWLL 324

  Fly  1994 CGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKH----YYTAMKKLGRKKPQKVIKR 2052
            .||....|:.:.:::.||..::.:         |:|...|    |...|.|      |::|:|
Mouse   325 LGSIIFRNIIVAMMVTNFQNIRSE---------LSEEMSHLEVQYKADMFK------QQIIQR 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 64/263 (24%)
Na_channel_gate 2009..2063 CDD:240441 11/48 (23%)
Ion_trans 2085..2320 CDD:278921
GPHH 2331..2386 CDD:293510
Catsper2NP_694715.2 Ion_trans 105..350 CDD:366146 69/290 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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