Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001342095.1 | Gene: | Scn3a / 20269 | MGIID: | 98249 | Length: | 1996 | Species: | Mus musculus |
Alignment Length: | 2607 | Identity: | 820/2607 - (31%) |
---|---|---|---|
Similarity: | 1187/2607 - (45%) | Gaps: | 845/2607 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 EKAVAKHQVVAYTQRSQVKHENRHIQLVREYGFHPRTKASVEDGDVLPRKFEPFPEHMYGKPLEE 75
Fly 76 IDT-FIYEETFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFN 139
Fly 140 CIFLAMT---ETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Fly 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMG 266
Fly 267 ELRNKCVRQVPTD--------------------WTNV--SHTDWQIWV-NDTDNWLYDEDELPVL 308
Fly 309 CGNLTGARHCPFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSV 373
Fly 374 SFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNEERKKDLLDHRDDSTFSFDPSVLNVKKLNKN 438
Fly 439 NKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGDDNKSHS-ATPSPGPSPRHSAT 502
Fly 503 ERPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPMAPTPKG-RISFQDSGMGVKNPNMLYPSD-- 564
Fly 565 -----------------YKGQLIANSGQPSSNSS-------------GVNRESSQDDSGVVDDHE 599
Fly 600 EQDTTNDMGH-------VSTVELALSPREV----------RLIKCNGNIA--------------- 632
Fly 633 -----------RIKNHNVYALHQEFSSE--------------VVVIDDLPD--RNCDRCVH---- 666
Fly 667 ----W-CTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKV 726
Fly 727 FTSIFTFECIVKLMALSK-DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQ 790
Fly 791 SWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTP--EKFDPD-PVPRWNFND 852
Fly 853 FFHSFMMIFRILCGEWIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSE 917
Fly 918 ELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQAA 982
Fly 983 VGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQ 1047
Fly 1048 LQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYD 1112
Fly 1113 SREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKS 1177
Fly 1178 LLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREELL 1242
Fly 1243 NCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSEFDNIIQ---SFEK 1304
Fly 1305 ELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYDSYDLS 1369
Fly 1370 SVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAVAATSA 1434
Fly 1435 SQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQL 1499
Fly 1500 RLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPLAALTE 1564
Fly 1565 HQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAADA 1629
Fly 1630 SSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTF 1694
Fly 1695 PSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLV 1759
Fly 1760 LIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFSKYFTSFWTILDFII 1824
Fly 1825 VFVSVFSLLIEE--NENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLV 1887
Fly 1888 FWLIFSIMGVQFFGGKFFKCVN-EMGELLPITEVNDKWDC--IEQNYTWINSKITFDHVGMGYLA 1949
Fly 1950 LLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNML 2014
Fly 2015 KKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLAMFYDLSNSRRFEIAIFVLIF 2079
Fly 2080 LNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHYFTVPWNVFDFLLVLASIF 2144
Fly 2145 GILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITF 2209
Fly 2210 IYAILGMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLM-IQPPDCDP-FIH 2272
Fly 2273 --GHTNGNCGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRW 2335
Fly 2336 SKYDPHATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLG 2400
Fly 2401 HVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKERS 2465
Fly 2466 NSGDSAT 2472 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 113/241 (47%) |
Ion_trans | 705..902 | CDD:278921 | 105/200 (53%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 154/255 (60%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 32/53 (60%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 125/238 (53%) | ||
GPHH | 2331..2386 | CDD:293510 | 31/54 (57%) | ||
Scn3a | NP_001342095.1 | Ion_trans | 127..434 | CDD:306908 | 140/306 (46%) |
Na_trans_cytopl | 510..697 | CDD:314757 | 29/206 (14%) | ||
Ion_trans | 759..972 | CDD:306908 | 116/215 (54%) | ||
Na_trans_assoc | 998..1201 | CDD:310839 | 71/822 (9%) | ||
Ion_trans | 1206..1478 | CDD:306908 | 158/271 (58%) | ||
Na_channel_gate | 1470..1522 | CDD:240441 | 32/53 (60%) | ||
Ion_trans | 1526..1782 | CDD:306908 | 133/255 (52%) | ||
GPHH | 1786..1849 | CDD:318993 | 36/62 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.720 |