DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and cca-1

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_001367691.1 Gene:cca-1 / 181045 WormBaseID:WBGene00000367 Length:1885 Species:Caenorhabditis elegans


Alignment Length:2548 Identity:546/2548 - (21%)
Similarity:928/2548 - (36%) Gaps:939/2548 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEA--------------EYI 155
            :|..||...|.|:..:.:..:.:||...||.|:.||:.|.|....|:.              :..
 Worm   109 ALRCFYQARPPRKWALQMVMSPWFDRITMAVIMINCVTLGMYRPCEDGPDCDTYRCQILDIIDNC 173

  Fly   156 FLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYAT------IGMEVGNLAGLRTFR 214
            ....::.||||||:|.|| .....|:.:.||.|||.::.:|.|.      :|..: ||..:||.|
 Worm   174 IFVYFAFEMVIKIMALGF-YGPAAYMSDTWNRLDFFIVMAGIAEFVLHEYLGGNI-NLTAIRTVR 236

  Fly   215 VLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQVPTD 279
            |||.|:.|:.:|.::.::|.||.:...|..|:.|..|...:|.:..:|::.|.|||:||..:|..
 Worm   237 VLRPLRAVNRIPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCVINLPKT 301

  Fly   280 --------WTNVSHTDWQIWVNDTD----------NWLYDEDELP------VLCGNLTGARH--- 317
                    :.||..|.:.| ..||.          |.|:....||      |.| |||...:   
 Worm   302 ISENQSALFNNVKLTRFYI-PEDTSLEYICSQPDANGLHTCSNLPPYTVDGVKC-NLTLDEYDKV 364

  Fly   318 ----C----PFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSVS 374
                |    .:...|..:..||..|..:|||..::.:..|.:|:|:.|.::...|.......:..
 Worm   365 TNDSCINWNIYYNECQVMQRNPFQGSVSFDNIGFAWVAIFLVISLEGWTDIMYYVQDAHSFWNWI 429

  Fly   375 FFTVVVFFGSFYLINLMLAVVALSYEE----EAEITNEERKKDLLDHRDDSTFSFDPSVLNVKKL 435
            :|.:::..|:|::|||.|.|:|..:.|    |.|...:|||  :|.:||  :.|...|.:.    
 Worm   430 YFVLLIVIGAFFMINLCLVVIATQFAETKRRETERMLQERK--MLLNRD--SISCTGSEIG---- 486

  Fly   436 NKNNKKKIDS--RKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGDDNKSHSATPSPGPSPR 498
            ..::|::.|:  ...|....::.::|:|..                    .|.::|.       .
 Worm   487 GASSKEEGDTVYAAFVRFIGHTFRRTKRAA--------------------KKKYTAY-------M 524

  Fly   499 HSATERPSALTMQAQK-QYQQMEQQHKLAKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPNMLYP 562
            ....||.|:...|.:| :...|....::.:......:........|....:.:|.||:...:...
 Worm   525 EERAERKSSERQQRRKSKLDDMATLSRIEEKAEDEEDETTITRENGDDQIEQNGDGVRIKRVKIE 589

  Fly   563 SDYKGQLIANSGQPSSNSSGVNRESSQDDSGVVDDHEEQDTTNDMGHVSTVELALSPREVRLIKC 627
            .:.|.::    |..:||.......||.::|   |:..|:|...|                     
 Worm   590 EEPKIKI----GNGNSNGPHYKHSSSDEES---DEDGEEDQVYD--------------------- 626

  Fly   628 NGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFEL 692
             |..|:.|:                                |..:.| .|:..:.|.|....|..
 Worm   627 -GEEAKKKS--------------------------------TPSKLW-WFREKIQKFVICDHFTR 657

  Fly   693 AITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMALSKDFFLC-GWNIFDL 756
            .|.:.|::||..:.:|:|...|.....|:..|..||::|..|.::|::|.....:|. |:|:||.
 Worm   658 GILVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKIIASGLFGYLADGFNLFDG 722

  Fly   757 LIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTL---ILVI 818
            .||..|:|::..|...||||||..||||:|||.:....::..|.:::.|   :.|:|:   :||:
 Worm   723 GIVALSVLELFQEGKGGLSVLRTFRLLRILKLVRFMPALRYQLVVMLRT---MDNVTVFFGLLVL 784

  Fly   819 VIYIFAVIGMQLFSKDY--TPEKF------------------------------------DPD-- 843
            .|:||:::||.||...:  ..|||                                    .||  
 Worm   785 FIFIFSILGMNLFGCKFCKVEEKFLGGLAKKCERKNFDTLLWALITVTLGMVLFGCKFCNHPDTG 849

  Fly   844 -------------PVPRWNFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEEEQGASTCFAIFLPT 894
                         ...|.||::|..:.:.:|:||..| |...|::.|.......|    ..|:..
 Worm   850 LQCTSAQVISSICECDRMNFDNFLFATVTVFQILTQEDWNMVLFNGMAQTNPWAA----LYFVAL 910

  Fly   895 LVMGNFMVLNLFLALLLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFA 959
            :..||:::.||.:|:|:..|.    :||:||       .|.:|   :..||:..|.:|.::|:  
 Worm   911 MTFGNYVLFNLLVAILVEGFQ----ESKEEE-------KRQLE---EDARKQAVEEEDERKRE-- 959

  Fly   960 EKFQQIVLDAQQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLH 1024
                                     ||.     ::|:|                           
 Worm   960 -------------------------LEL-----IIAKT--------------------------- 967

  Fly  1025 DGLHTIVDGLEYDDTGDLPEQIQLQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLT 1089
                                                                             
 Worm   968 ----------------------------------------------------------------- 967

  Fly  1090 PFVQAERRLQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSL 1154
                                                        |.|          :||.|.:.
 Worm   968 --------------------------------------------TSP----------AFNNGVAP 978

  Fly  1155 QDNSSRRYGSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQS 1219
            .:.:.:|..|.|              .|||.|                                 
 Worm   979 AECTCQRPSSPE--------------ESPSPR--------------------------------- 996

  Fly  1220 LNSMSIEQDELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQP 1284
                      |||                                        .:..||     |
 Worm   997 ----------LLS----------------------------------------ANYHPS-----P 1006

  Fly  1285 ENETMVEHSEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASE 1349
            |.    :||                           :||.           ||::...::     
 Worm  1007 ER----KHS---------------------------ANLD-----------AIIDKRLVL----- 1024

  Fly  1350 RSAADEVVLPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKIC 1414
            |::|        |:|...:|.            .|...:|.|                       
 Worm  1025 RNSA--------PFDRSPVSE------------GRDDSRLNR----------------------- 1046

  Fly  1415 DQIHAPFVAMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPIS 1479
               ||..|    :.||         |..|:.|::|                              
 Worm  1047 ---HASLV----LPVA---------NGVPYRRQRV------------------------------ 1065

  Fly  1480 TLRIESEKMPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEP 1544
                                          :|:..|.                            
 Worm  1066 ------------------------------HSWSGLC---------------------------- 1072

  Fly  1545 PTLAQISSLKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLD 1609
                                  .||:..      .|.|             |:|..:|       
 Worm  1073 ----------------------HHFNPN------CPVH-------------GRRALIE------- 1089

  Fly  1610 KAASFQSARTESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTR-LTEKPWHCLVSYV 1673
                 ..||.:     ..:||..|..|:|::.:::::       |.:.|.| |.:|.  ||.:..
 Worm  1090 -----TYAREK-----FLEASQELKQALAEEEKRNEA-------KQNTFVRKLLKKT--CLHNRT 1135

  Fly  1674 D-DLTVGGRRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHW 1737
            : .|.:.|.:|                                       |..:.|:.| :.|.|
 Worm  1136 EFSLFLMGPKN---------------------------------------PLRIKCLQT-TQKKW 1160

  Fly  1738 TRVRTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMIL 1802
                           |::.||..|..:.|||..|..::..:...::.|:...:.|.:||..||::
 Worm  1161 ---------------FDYTVLFFIGINCITLAMERPSIPPDSFERQFLHISGYIFTVIFTGEMMM 1210

  Fly  1803 KWLA----LGFSKYFTSFWTILDFIIVFVSVFSL---LIEENENLK---VLRSLRTLRALRPLRA 1857
            |.:|    :|.:.||...|.|||.|:|.:|:.::   |:...::.|   |:|.||.||||||||.
 Worm  1211 KVIANGCFIGQAAYFKDGWNILDGILVVISLINIAFELLATGDSPKIFGVIRVLRLLRALRPLRV 1275

  Fly  1858 ISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVN-EMGELLPITEVN 1921
            |:|..|:::||..|:.::..|.|::|:|..|::||.|:|||.|.|..:.|:. |:|      .|.
 Worm  1276 INRAPGVKLVVMTLISSLKPIGNIVLICCTFFIIFGILGVQLFKGMMYHCIGPEVG------NVT 1334

  Fly  1922 DKWDCIEQ-NYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAY 1985
            .|.||||. ...|:|.:..||::|...::|..:::.:||:.:|...:||.|||:||....|.:..
 Worm  1335 TKADCIEDYRNKWVNHRYNFDNLGQALMSLFVLSSKDGWVSIMYQGIDAVGVDVQPIENYNEWRM 1399

  Fly  1986 IYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKK----- 2045
            |||:.|::...||.||:|:||:::||:..|:..|   .||...|.:|.   ..:||.|:|     
 Worm  1400 IYFISFLLLVGFFVLNMFVGVVVENFHKCKEALE---KEMREKEKEKR---LKRKLKRQKFEESM 1458

  Fly  2046 --PQKVIKR------PINHFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEV 2102
              .:|.::|      ...|.....:.:..|:.|::||..:|.:|:::|.:|.|..|..:.::|:.
 Worm  1459 AGKRKKMERNYPYYHDYGHTRLFLHGIVTSKYFDLAIAAVIGINVISMAMEFYMMPMGLKYVLKA 1523

  Fly  2103 SNAFFTTVFGLEAIVKIVGLRY-HYFTVPWNVFDFLLVLASIFGILMEDI-MIDLPISPTLLRVV 2165
            .|.|||.||.|||.:|::.|.: .:|...||..|..:|:.||.||:.|:. .::|||:||::||:
 Worm  1524 LNYFFTAVFTLEAAMKLIALGFKRFFIEKWNRLDMFIVILSIAGIIFEEFEALELPINPTIIRVM 1588

  Fly  2166 RVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNVKLQ----- 2225
            ||.||.|:|:|:|.|||||.||..:..:||.:.|:|:|..|:.||:|.||:.|||.::..     
 Worm  1589 RVLRIARVLKLLKMAKGIRSLLDTVGEALPQVGNLGSLFFLLFFIFAALGVELFGKLECSEDHPC 1653

  Fly  2226 GALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQPPDCDPFIHGHTNGNCGHPLLAITYFT 2290
            ..|.:..:|:.||.:...|||:.|...||.:::..:  ..|||...|..|| .|..|:||..:|.
 Worm  1654 DGLGEHAHFKNFGMAFLTLFRIATGDNWNGIMKDAL--RDDCDSSDHCETN-CCVDPILAPCFFV 1715

  Fly  2291 SFIIISYMIVINMYIAIILENFNQAHQEEEIGIVE-------------DDLEMFYIRWSKYDPHA 2342
            .|::||..:::|:.:|:::::..::::.:..|..|             ||.|:.    .:::|.|
 Worm  1716 IFVLISQFVLVNVVVAVLMKHLEESNKRDAEGPAEPTGENIENEITKSDDDEIV----EEHEPLA 1776

  Fly  2343 TQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGN-KIHCLDILHALVKHVLGHVEETD 2406
            .:.:...:|.:...:.:.|            :..:|...|. |...:.:|...:..|..|:||  
 Worm  1777 IEHVKEGELDEEEETEEGP------------TTQIPDGHGGIKRLSMQVLEQELIEVERHLEE-- 1827

  Fly  2407 NFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRRKREKERSNSGDSA 2471
            .:::..|.:..:.:...|  .|:|.:.......|.               |..|.:.|:|   ||
 Worm  1828 RYRRASECLGGELQPLNP--GEIEDLDDPEFRPRS---------------RSHRPRARTN---SA 1872

  Fly  2472 TQTSSPGGWQSKL 2484
            ....|.|..:|.|
 Worm  1873 LSNKSRGSHKSAL 1885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921 73/273 (27%)
Ion_trans 705..902 CDD:278921 67/254 (26%)
Ion_trans 1768..2019 CDD:278921 93/262 (35%)
Na_channel_gate 2009..2063 CDD:240441 15/66 (23%)
Ion_trans 2085..2320 CDD:278921 88/241 (37%)
GPHH 2331..2386 CDD:293510 7/55 (13%)
cca-1NP_001367691.1 Ion_trans 129..461 CDD:395416 93/335 (28%)
Ion_trans 659..938 CDD:395416 80/296 (27%)
Ion_trans 1159..1430 CDD:395416 99/291 (34%)
Ion_trans 1488..1721 CDD:395416 90/235 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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