DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and Cacna1c

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:XP_036021662.1 Gene:Cacna1c / 12288 MGIID:103013 Length:2245 Species:Mus musculus


Alignment Length:3073 Identity:632/3073 - (20%)
Similarity:1008/3073 - (32%) Gaps:1319/3073 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YGKPLEEIDTFIYEETFCVVSKRFRKNYIHRFTGT---KSLFLFYPWSPARRVCVYIATNQFFDY 130
            ||||.::..|                      |.|   ::|......:|.||.|:.|...:.|:.
Mouse   116 YGKPKKQGGT----------------------TATRPPRALLCLTLKNPIRRACISIVEWKPFEI 158

  Fly   131 CVMATILFNCIFLAM------------TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRN 183
            .::.||..||:.||:            ...:|..||:||.|:::|..:|:||.|.|.:...||||
Mouse   159 IILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRN 223

  Fly   184 PWNWLDFVVITSGYATIGMEV-----------GNLAG-----LRTFRVLRALKTVSIMPGLKTII 232
            .||.|||:::..|..:..:|.           |..||     ||.|||||.|:.||.:|.|:.::
Mouse   224 GWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVL 288

  Fly   233 NALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVRQ-----VPTDWTNVSHTDWQIWV 292
            |:::.:...|..:..|.:|.::::|:..|:::||::...|..|     ||.              
Mouse   289 NSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIIDVPA-------------- 339

  Fly   293 NDTDNWLYDEDELPVLCGNLTG-ARHCPFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDY 356
                    :||..|  |...|| .|.|....||....:.|.||.||||||.::|||.||.||::.
Mouse   340 --------EEDPSP--CALETGHGRQCQNGTVCKPGWDGPKHGITNFDNFAFAMLTVFQCITMEG 394

  Fly   357 WENV-YNMVLATCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNEERKKDLLDHRDD 420
            |.:| |.|..|....:...:|..:|.||||:::||:|                            
Mouse   395 WTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVL---------------------------- 431

  Fly   421 STFSFDPSVLNVKKLNKNNKKKIDSRKGVLLASYSKKKTRRKKTKGGKEGGTNGNGNGSNGDDNK 485
                                       |||...:||::.:.|                :.||   
Mouse   432 ---------------------------GVLSGEFSKEREKAK----------------ARGD--- 450

  Fly   486 SHSATPSPGPSPRHSATERPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPMAPTPKGRISFQDS 550
                                    .|..::.||:|:                             
Mouse   451 ------------------------FQKLREKQQLEE----------------------------- 462

  Fly   551 GMGVKNPNMLYPSDYKGQL----IANSGQPSSNSSGVNRESSQDDSGVVDDHEEQDTTND-MGHV 610
                         |.||.|    .|....|.:...|::.:..::.......|:::..... ..|.
Mouse   463 -------------DLKGYLDWITQAEDIDPENEDEGMDEDKPRNRGAPAGLHDQKKGKFAWFSHS 514

  Fly   611 STVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCD-RCVH------WC 668
            :...:::...|.                     :..::|.|...|:...||. |..|      :.
Mouse   515 TETHVSMPTSET---------------------ESVNTENVAGGDIEGENCGARLAHRISKSKFS 558

  Fly   669 TDYESWLQFQNCLYK---VVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSI 730
            ..:..|.:|  |..|   .|:..:|...:...:.|||..:|.||:..........|..||...::
Mouse   559 RYWRRWNRF--CRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPHWLTEVQDTANKALLAL 621

  Fly   731 FTFECIVKLMALS-KDFFLCGWNIFDLLIVTASLLDIIFELVD-------GLSVLRGLRLLRVLK 787
            ||.|.::|:.:|. :.:|:..:|.||..||...:|:.|  ||:       |:||||.:||||:.|
Mouse   622 FTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETI--LVETKIMSPLGISVLRCVRLLRIFK 684

  Fly   788 LAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVPRWNFND 852
            :.:.|.::..|::.:::::.::.:|.|:|.:.|.||:::|||||...:   .||.....|..|::
Mouse   685 ITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKF---NFDEMQTRRSTFDN 746

  Fly   853 FFHSFMMIFRILCGE-WIEPLWDCMRA---EEEQGASTCFAIFLPTLVMGNFMVLNLFLALLL-N 912
            |..|.:.:|:||.|| |...::|.:.|   ....|...|. .|:...:.||:::||:|||:.: |
Mouse   747 FPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCI-YFIILFICGNYILLNVFLAIAVDN 810

  Fly   913 SFNSEELKSKKEEVGEESKLARSIERVRDLIRKK--RQERKDRKERKFAEKFQQIVLDAQQAHAQ 975
            ..::|.|.|.::|..||.:            |||  |..|....|:|     |:::         
Mouse   811 LADAESLTSAQKEEEEEKE------------RKKLARPARTASPEKK-----QEVM--------- 849

  Fly   976 TLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTG 1040
                         :||.|           :||..                               
Mouse   850 -------------EKPAV-----------EESKE------------------------------- 859

  Fly  1041 DLPEQIQLQAHPLPPTSD-SMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQHQISS 1104
               |:|:|::    .|:| ..|||.:..|                 .:|.|              
Mouse   860 ---EKIELKS----ITADGESPPTTKINM-----------------DDLQP-------------- 886

  Fly  1105 GVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDE 1169
                    |..|                |..|::|...:|                         
Mouse   887 --------SENE----------------DKSPHSNPDTAG------------------------- 902

  Fly  1170 AFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDELLSQQ 1234
                                                                    |:||     
Mouse   903 --------------------------------------------------------EEDE----- 906

  Fly  1235 GNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSEFDNII 1299
                                ||.|:..|.:.|.:|                              
Mouse   907 --------------------EEPEMPVGPRPRPLS------------------------------ 921

  Fly  1300 QSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYD 1364
                             |..|...:.|.|   ||:...:                          
Mouse   922 -----------------ELHLKEKAVPMP---EASAFFI-------------------------- 940

  Fly  1365 SYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAV 1429
                                                   ||.:|..|..|.:|            
Mouse   941 ---------------------------------------FSPNNRFRLQCHRI------------ 954

  Fly  1430 AATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLH 1494
                                    |....|..|.|.                             
Mouse   955 ------------------------VNDTIFTNLILF----------------------------- 966

  Fly  1495 GPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPL 1559
               .:.|.|:||                                                     
Mouse   967 ---FILLSSISL----------------------------------------------------- 975

  Fly  1560 AALTEHQQHFHATSIQAAPTPA-HTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHS 1623
                            ||..|. ||                             ||::       
Mouse   976 ----------------AAEDPVQHT-----------------------------SFRN------- 988

  Fly  1624 SGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAY 1688
                                                       |.|                   
Mouse   989 -------------------------------------------HIL------------------- 991

  Fly  1689 NDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAF 1753
                                         |||.                                
Mouse   992 -----------------------------FYFD-------------------------------- 995

  Fly  1754 EWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGF----SKYFT 1814
              .|...||...|.|              ::|...::.|..||.:|:|||..|.|.    ..:..
Mouse   996 --IVFTTIFTIEIAL--------------KILGNADYVFTSIFTLEIILKMTAYGAFLHKGSFCR 1044

  Fly  1815 SFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIF 1879
            :::.|||.::|.||:.|..|:.:. :.|::.||.||.|||||||:|.:|::.||..:..||.:|.
Mouse  1045 NYFNILDLLVVSVSLISFGIQSSA-INVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIG 1108

  Fly  1880 NVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIE-----------QNYTW 1933
            |:::|..:...:|:.:|||.|.||.:.|.:...:    ||...|.:.|.           |..:|
Mouse  1109 NIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQ----TEAECKGNYITYKDGEVDHPIIQPRSW 1169

  Fly  1934 INSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAY-----IYFVIFIV 1993
            .|||..||:|....:||..|:|||||.|::..::|:...|..|     :|.|     |:|:|:|:
Mouse  1170 ENSKFDFDNVLAAMMALFTVSTFEGWPELLYRSIDSHTEDKGP-----IYNYRVEISIFFIIYII 1229

  Fly  1994 CGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPI---N 2055
            ..:||.:|:|:|.:|..|.      |.|..|....|..|:....::...:.:|   ::|.|   .
Mouse  1230 IIAFFMMNIFVGFVIVTFQ------EQGEQEYKNCELDKNQRQCVEYALKARP---LRRYIPKNQ 1285

  Fly  2056 HFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIV 2120
            |...::| :.||..||..:||||.||.:.:.::||.|.......:.:.|..||.:|.:|.|:|::
Mouse  1286 HQYKVWY-VVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNILNMLFTGLFTVEMILKLI 1349

  Fly  2121 GLR-YHYFTVPWNVFDFLLVLASIFGILMEDI-------------------MIDLPI-------- 2157
            ..: ..||:.||||||||:|:.||..:::.:.                   ::|:.|        
Mouse  1350 AFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVHPAEH 1414

  Fly  2158 ---SPTL---------LRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFI 2210
               ||::         :...|:||:.|:::|:...:|||.||:..:.|..||..:..|:.::.||
Mouse  1415 TQCSPSMSAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFI 1479

  Fly  2211 YAILGMSLFGNVKLQGALDDMV------NFQTFGRSMQLLFRLMTSAGWNDVLESLMIQP----- 2264
            ||::||.:||.:    ||:|..      |||||.:::.||||..|...|.|::  |...|     
Mouse  1480 YAVIGMQVFGKI----ALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIM--LACMPGKKCA 1538

  Fly  2265 PDCDPFIHGHTNGN--CGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDD 2327
            |:.:|  ...|.|.  ||.. .|:.||.||.::...::||:::|:|::||:...::..| :....
Mouse  1539 PESEP--SNSTEGETPCGSS-FAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSI-LGPHH 1599

  Fly  2328 LEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPLGISK--PNNVA---LVSFNLPISKGNKIHC 2387
            |:.|...|::|||.|...|....:...:..:.||||..|  |:.||   |||.|:|::....:..
Mouse  1600 LDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMF 1664

  Fly  2388 LDILHALVKHVLGHVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEK--------- 2443
            ...|.|||:..| .::...|.:|..|::....||               ||||...         
Mouse  1665 NATLFALVRTAL-RIKTEGNLEQANEELRAIIKK---------------IWKRTSMKLLDQVVPP 1713

  Fly  2444 ------------AAKTIQTGWKEYLRR-KREKERSNSGDSATQTSSPGGWQSKLSALNFFHLQVS 2495
                        |...||    ||.|: |:.||:              |...|.|..|...||..
Mouse  1714 AGDDEVTVGKFYATFLIQ----EYFRKFKKRKEQ--------------GLVGKPSQRNALSLQAG 1760

  Fly  2496 RRGTACSSRASSRKSSRASDASDLSELAGPWLNLPLMLVSG----ADEVVKDIKQ------QNDE 2550
            .|                    .|.:: ||.:.   ..:||    .:|:.|.:|:      ::|.
Mouse  1761 LR--------------------TLHDI-GPEIR---RAISGDLTAEEELDKAMKEAVSAASEDDI 1801

  Fly  2551 LGKRGSIF---VEAPRASRRRSFYNFFL--------------------RHQDAVDDSLTSPSVHR 2592
            ..:.|.:|   |...::..|.:|...|.                    .|:..||.:.| ||.:.
Mouse  1802 FRRAGGLFGNHVTYYQSDSRGNFPQTFATQRPLHINKTGNNQADTESPSHEKLVDSTFT-PSSYS 1865

  Fly  2593 KTAMNNTTNTTSNSA-----STSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRAS 2652
            .|..|...|..:|:|     ..:|.:|:.:|....|                             
Mouse  1866 STGSNANINNANNTALGRFPHPAGYSSTVSTVEGHG----------------------------- 1901

  Fly  2653 SFIRKKPPLERGLSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSLSLRPDNATLVHVLV 2717
                  |||      ..|:||.:.|:...:....      |.|.|....:..:.||....|    
Mouse  1902 ------PPL------SPAVRVQEAAWKLSSKRCH------SRESQGATVNQEIFPDETRSV---- 1944

  Fly  2718 HRESEEYKEEDESSPSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMDTCAMPTVQIMVDSP 2782
             |.|||  .|..|.||:        :..||.|.|..          |....||.....:.:..||
Mouse  1945 -RMSEE--AEYCSEPSL--------LSTDMFSYQED----------EHRQLTCPEEDKREIQPSP 1988

  Fly  2783 KDPPRGDFSSAPIDDVGAPIDVNVQGDTSQVFYDYNPEKATDDQGNGQDETAQFESLPDR----- 2842
            |   |....||.:.              .:..:.....|...|||.   :.:|..:||..     
Mouse  1989 K---RSFLRSASLG--------------RRASFHLECLKRQKDQGG---DISQKTALPLHLVHHQ 2033

  Fly  2843 -----------QR------------XPPV-----NTPLRDSEKRSSRGSRSSSSSTSSIRS--CS 2877
                       ||             |||     ..|||........|:.||....||..|  ||
Mouse  2034 ALAVAGLSPLLQRSHSPTTFPRPCPTPPVTPGSRGRPLRPIPTLRLEGAESSEKLNSSFPSIHCS 2098

  Fly  2878 S-SSSSSAASAAAPSARR 2894
            | |..::|.|.::..|||
Mouse  2099 SWSEETTACSGSSSMARR 2116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921 80/241 (33%)
Ion_trans 705..902 CDD:278921 63/208 (30%)
Ion_trans 1768..2019 CDD:278921 85/270 (31%)
Na_channel_gate 2009..2063 CDD:240441 10/56 (18%)
Ion_trans 2085..2320 CDD:278921 83/287 (29%)
GPHH 2331..2386 CDD:293510 20/59 (34%)
Cacna1cXP_036021662.1 Ion_trans 153..446 CDD:395416 102/371 (27%)
Ion_trans 578..819 CDD:395416 75/246 (30%)
Ion_trans 957..1254 CDD:395416 110/588 (19%)
Ion_trans 1296..1593 CDD:395416 92/305 (30%)
GPHH 1602..1655 CDD:407139 19/52 (37%)
Ca_chan_IQ 1666..1737 CDD:400901 20/90 (22%)
CAC1F_C 1759..2194 CDD:407123 95/475 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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