DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaCP60E and CATSPER2

DIOPT Version :9

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_001269239.1 Gene:CATSPER2 / 117155 HGNCID:18810 Length:534 Species:Homo sapiens


Alignment Length:419 Identity:84/419 - (20%)
Similarity:172/419 - (41%) Gaps:105/419 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1635 LAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDP-------- 1691
            :|..|:.||.|....||.:     :||.:.  ..|:.::..|:....|::.....||        
Human     7 MAAYQQEEQMQLPRADAIR-----SRLIDT--FSLIEHLQGLSQAVPRHTIRELLDPSRQKKLVL 64

  Fly  1692 ------MTFPSYGATKAAKVPDDCFPQKCYDHFYFRCP----------WFMSCMDTQSAKHWTRV 1740
                  :.|    :.|..::......|:.....:.||.          |.:.|            
Human    65 GDQHQLVRF----SIKPQRIEQISHAQRLLSRLHVRCSQRPPLSLWAGWVLEC------------ 113

  Fly  1741 RTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKT----LKRVLYWINFSFCLIFVVEMI 1801
                      |.|:.|::.|:|.::|.|..|...|:...|    ||..|....:...|||::|::
Human   114 ----------PLFKNFIIFLVFLNTIILMVEIELLESTNTKLWPLKLTLEVAAWFILLIFILEIL 168

  Fly  1802 LKWLALGFSKYFTSFWTILDFIIVFVSVFS---LLIEENENLKVLRSLRTLRALRPLRAISRWQG 1863
            ||||: .||.::.|.|.:.||::..:|:..   :|:........|:.||..|.||.|:.:::::.
Human   169 LKWLS-NFSVFWKSAWNVFDFVVTMLSLLPEVVVLVGVTGQSVWLQLLRICRVLRSLKLLAQFRQ 232

  Fly  1864 MRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIE 1928
            ::|::..|:.|:.|:..:|::.|:|:.||::.||..|                            
Human   233 IQIIILVLVRALKSMTFLLMLLLIFFYIFAVTGVYVF---------------------------- 269

  Fly  1929 QNYTW-----INSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYF 1988
            ..||.     :...:.|..:....:.:..:.|.:.|..::.|......|       :.:::.|||
Human   270 SEYTRSPRQDLEYHVFFSDLPNSLVTVFILFTLDHWYALLQDVWKVPEV-------SRIFSSIYF 327

  Fly  1989 VIFIVCGSFFTLNLFIGVIIDNFNMLKKK 2017
            :::::.||....::.:.:::.||..::|:
Human   328 ILWLLLGSIIFRSIIVAMMVTNFQNIRKE 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 152..371 CDD:278921
Ion_trans 705..902 CDD:278921
Ion_trans 1768..2019 CDD:278921 57/262 (22%)
Na_channel_gate 2009..2063 CDD:240441 3/9 (33%)
Ion_trans 2085..2320 CDD:278921
GPHH 2331..2386 CDD:293510
CATSPER2NP_001269239.1 Ion_trans 178..356 CDD:278921 39/212 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.