Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826731.2 | Gene: | scn1a / 100488621 | XenbaseID: | XB-GENE-978019 | Length: | 2020 | Species: | Xenopus tropicalis |
Alignment Length: | 2677 | Identity: | 849/2677 - (31%) |
---|---|---|---|
Similarity: | 1204/2677 - (44%) | Gaps: | 842/2677 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 FNDEKAVAKHQVVAYTQRSQVKHENRHIQLVREYGFHPRTKASVEDGDVLPRKFEPFPEHMYGKP 72
Fly 73 LEEIDT-FIYEETFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATI 136
Fly 137 LFNCIFLAMT---ETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYA 198
Fly 199 TIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQV 263
Fly 264 YMGELRNKCVRQVPTDW----------------------TNVSHTDWQIWVNDTDNWLYDEDELP 306
Fly 307 -VLCGNLTGARHCPFEYVCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGP 370
Fly 371 MSVSFFTVVVFFGSFYLINLMLAVVALSYEEEAEITNEERKKDLLDHRDDSTFSFDPSVLNVKK- 434
Fly 435 -----------LNKNNKKKIDSRKGVL---------LASYSKKKTR-RKKTKGGKEGGTNGNGNG 478
Fly 479 SNGDDN---KSHSAT----------------------PSPGP----------SPRHSA-----TE 503
Fly 504 RPSALTMQAQKQYQQMEQQHKLAKSGSGGSNNPMAPTPKG--------RISFQDSGMGV--KNPN 558
Fly 559 MLYPSDYKGQLIANSGQPSSNSSGVN--------RESSQDDSGVVDDHEEQDTTNDMGHVSTVEL 615
Fly 616 ALSP--REVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVH--------W-CT 669
Fly 670 DYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFE 734
Fly 735 CIVKLMALSK-DFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVL 798
Fly 799 LSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDY------TPEKFDPDPVPRWNFNDFFHSF 857
Fly 858 MMIFRILCGEWIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSEELKSK 922
Fly 923 KEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQAAVGLER 987
Fly 988 GDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHP 1052
Fly 1053 LPPTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQYDSREEA 1117
Fly 1118 TYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRS 1182
Fly 1183 PSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDEL--LSQQGNLREELLNCD 1245
Fly 1246 QKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSEFDNIIQSFEKELEEIK 1310
Fly 1311 RSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYDSYDLSSVPRRS 1375
Fly 1376 QSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAVAATSASQAQPN 1440
Fly 1441 QSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLRLDSLS 1505
Fly 1506 LKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPLAALTEHQQHFH 1570
Fly 1571 ATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAADASSALAL 1635
Fly 1636 AMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGAT 1700
Fly 1701 KAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLVLIFASS 1765
Fly 1766 ITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFSKYFTSFWTILDFIIVFVSVF 1830
Fly 1831 SLLIEE--NENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFS 1893
Fly 1894 IMGVQFFGGKFFKCVN-EMGELLPITEVNDKWDCIEQNYT--WINSKITFDHVGMGYLALLQVAT 1955
Fly 1956 FEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEG 2020
Fly 2021 GVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPINHFLAMFYDLSNSRRFEIAIFVLIFLNMLTM 2085
Fly 2086 GIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHYFTVPWNVFDFLLVLASIFGILMED 2150
Fly 2151 IMIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILG 2215
Fly 2216 MSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQ-PPDCDPFIH---GHTN 2276
Fly 2277 GNCGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPH 2341
Fly 2342 ATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKIHCLDILHALVKHVLGHVEETD 2406
Fly 2407 NFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQTGWKEYLRR----------KRE 2461
Fly 2462 KERSNS-------------GDSATQ-------TSSPGGWQSKLSALNFFHLQVSRRGTACSSRAS 2506
Fly 2507 SRKSSRASDASD 2518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 112/241 (46%) |
Ion_trans | 705..902 | CDD:278921 | 105/203 (52%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 156/255 (61%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 30/53 (57%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 124/238 (52%) | ||
GPHH | 2331..2386 | CDD:293510 | 29/54 (54%) | ||
scn1a | XP_012826731.2 | Ion_trans | 128..435 | CDD:395416 | 141/306 (46%) |
Na_trans_cytopl | 515..723 | CDD:403218 | 38/220 (17%) | ||
Ion_trans | 772..985 | CDD:395416 | 116/218 (53%) | ||
Na_trans_assoc | 1011..1222 | CDD:399489 | 69/612 (11%) | ||
Ion_trans | 1226..1498 | CDD:395416 | 160/271 (59%) | ||
Na_channel_gate | 1490..1542 | CDD:240441 | 30/53 (57%) | ||
Ion_trans | 1547..1802 | CDD:395416 | 132/254 (52%) | ||
GPHH | 1814..1861 | CDD:407139 | 26/46 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |