DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3650 and LOC548809

DIOPT Version :10

Sequence 1:NP_611971.1 Gene:CG3650 / 37974 FlyBaseID:FBgn0035070 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 XenbaseID:XB-GENE-29098979 Length:334 Species:Xenopus tropicalis


Alignment Length:296 Identity:89/296 - (30%)
Similarity:133/296 - (44%) Gaps:57/296 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WRPLFLLQLTQ---------------LLLGLASGQI------QPRIVGGTTTTLSAVGG------ 39
            ||.:..:.||.               |||..||..:      .|||.|....:...|||      
 Frog     3 WRSIVPVSLTAAHTVAETMEFAGIILLLLVSASPTVSQNTTASPRICGSPLVSSRIVGGTDATNG 67

  Fly    40 ---FVVNLRYDGTFYCGGSLVTSSHVVTAAHCLK------GYQASRITVQGGVSKLSQSGVVRRV 95
               :.::|||.|:..||||::::..::|||||.:      .||......|  :|..|.|.::..|
 Frog    68 AWPWQISLRYKGSHICGGSVISNQWIMTAAHCFEYSRTPSDYQVLLGAYQ--LSVASASELLSSV 130

  Fly    96 ARYFIPNGFSSSSLNWDVGVIRLQSALTGSGITTIPLCQVQWNPGNY--MR--VSGWGTTRYGNS 156
            ||..:...|:......|:.:::|.|.:..:.. .:|:|......|.|  |:  |:|||......:
 Frog   131 ARVIVNPSFTIPGGPGDIALLKLTSPVAYTEY-ILPVCVPSSASGFYEGMQCWVTGWGNIGSAVT 194

  Fly   157 SPSNQ-LRTVRIQLIRKKVCQRAYQGRDTLTAS-------TFCA--RTGGKDSCSGDSGGGVIFK 211
            .|..| |:.|...||....|.:.|..:..::::       ..||  ..|.||||.|||||.::.:
 Frog   195 LPYPQTLQQVMTPLISWSTCNQMYHVQSGISSNIAIVPKDQICAGYAAGQKDSCQGDSGGPLVCQ 259

  Fly   212 NQ----LCGIVSWGLGCANAQYPGVYTSVHRVRSFI 243
            .|    ..||||||.|||.|..|||||.|...:|::
 Frog   260 LQGVWYQIGIVSWGDGCAQASRPGVYTLVPNFKSWL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3650NP_611971.1 Tryp_SPc 25..243 CDD:214473 79/250 (32%)
LOC548809NP_001016055.2 Tryp_SPc 58..297 CDD:238113 76/241 (32%)

Return to query results.
Submit another query.