DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3650 and F12

DIOPT Version :10

Sequence 1:NP_611971.1 Gene:CG3650 / 37974 FlyBaseID:FBgn0035070 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_000496.2 Gene:F12 / 2161 HGNCID:3530 Length:615 Species:Homo sapiens


Alignment Length:236 Identity:74/236 - (31%)
Similarity:106/236 - (44%) Gaps:29/236 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIVGGTTTTLSAVGG---FVVNLRYDGTFYCGGSLVTSSHVVTAAHCLKGYQASR-ITVQGGVSK 85
            |:|||    |.|:.|   ::..| |.|..:|.|||:....|:||||||:...|.. :||..|..:
Human   372 RVVGG----LVALRGAHPYIAAL-YWGHSFCAGSLIAPCWVLTAAHCLQDRPAPEDLTVVLGQER 431

  Fly    86 LSQS---GVVRRVARYFIPNGFSSSSLNWDVGVIRLQSALTGSGITTIPLCQVQWNPGNYMR--- 144
            .:.|   .....|..|.:...||..|...|:.::|||....||.....|..|....|....|   
Human   432 RNHSCEPCQTLAVRSYRLHEAFSPVSYQHDLALLRLQEDADGSCALLSPYVQPVCLPSGAARPSE 496

  Fly   145 -----VSGWGTTRYGNSSPSNQLRTVRIQLIRKKVCQRAYQGRDTLTASTFCA--RTGGKDSCSG 202
                 |:|||....|....::.|:..::..:..:.|........::.....||  ..||.|:|.|
Human   497 TTLCQVAGWGHQFEGAEEYASFLQEAQVPFLSLERCSAPDVHGSSILPGMLCAGFLEGGTDACQG 561

  Fly   203 DSGGGVIFKNQ-------LCGIVSWGLGCANAQYPGVYTSV 236
            ||||.::.::|       |.||:|||.||.:...|||||.|
Human   562 DSGGPLVCEDQAAERRLTLQGIISWGSGCGDRNKPGVYTDV 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3650NP_611971.1 Tryp_SPc 25..243 CDD:214473 74/236 (31%)
F12NP_000496.2 FN2 41..88 CDD:128373
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
Kringle 217..295 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..359
Tryp_SPc 373..612 CDD:238113 73/235 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.