DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and HB52

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_200209.1 Gene:HB52 / 835481 AraportID:AT5G53980 Length:156 Species:Arabidopsis thaliana


Alignment Length:62 Identity:23/62 - (37%)
Similarity:36/62 - (58%) Gaps:5/62 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 GKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK 180
            ||.||.|..:.     |::||.:.|...:.|....:.:|:..|||.|.||.:||||:|:::|
plant     8 GKNKKKRLTQD-----QVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFK 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 19/56 (34%)
HB52NP_200209.1 Homeodomain 11..64 CDD:459649 20/57 (35%)

Return to query results.
Submit another query.