DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and HB-7

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_199499.3 Gene:HB-7 / 834733 AraportID:AT5G46880 Length:826 Species:Arabidopsis thaliana


Alignment Length:331 Identity:72/331 - (21%)
Similarity:111/331 - (33%) Gaps:90/331 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QQHAAAGYGGIRSTYQHFGPQGGQDSGFPSPRSAL--------GYPFPPMHQNSYSGYHLGSYAP 94
            ||.:::..|.|::...:|.|.....|..|.....:        ......|.:|..:|...||.:.
plant    21 QQPSSSSPGTIQNPNFNFIPFNSYSSIIPKEEHGMMSMMMMMGDGTVEEMMENGSAGGSFGSGSE 85

  Fly    95 PCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAA 159
            ....|...:.|..::..|.......|.|:..:    :::.|:|::...|:...:....:|..|:|
plant    86 QAEDPKFGNESDVNELHDDEQPPPAKKKRYHR----HTNRQIQEMEALFKENPHPDDKQRKRLSA 146

  Fly   160 SLGLTQTQVKIWFQNRRSKYK-------KMMKAAQGPGTNS------------GMPLGGGGPNPG 205
            .|||...|||.||||||::.|       .:|..|:.....|            ..|..||....|
plant   147 ELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAENDNLKSENCHLQAELRCLSCPSCGGPTVLG 211

  Fly   206 QHSPNQMHSGELANGRFLWAALETNGTLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVS 270
            ....|::|   :.|.|.    .|....|..:.|        ..:|.|...:||       |.|:.
plant   212 DIPFNEIH---IENCRL----REELDRLCCIAS--------RYTGRPMQSMPP-------SQPLI 254

  Fly   271 ELSPEFPPTGLSPPTQAPWDQKPHWIDHKP-------------PPQ----MTPQPPHPAATLHP- 317
            ..||..|                   .|:|             |.|    |...||...|...| 
plant   255 NPSPMLP-------------------HHQPSLELDMSVYAGNFPEQSCTDMMMLPPQDTACFFPD 300

  Fly   318 QTHHHN 323
            ||.::|
plant   301 QTANNN 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 19/62 (31%)
HB-7NP_199499.3 Homeodomain 112..167 CDD:459649 19/58 (33%)
START_ArGLABRA2_like 318..554 CDD:176884
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.