DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and PDF2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_567274.1 Gene:PDF2 / 825828 AraportID:AT4G04890 Length:743 Species:Arabidopsis thaliana


Alignment Length:177 Identity:41/177 - (23%)
Similarity:68/177 - (38%) Gaps:52/177 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 HQNSYSGYHLGSYAPPCASPPKDDFSISDKCED-----SGLRV---NGKGKKMRKPRT------- 129
            |.|.:..:|:....|...|  .:|..|:...||     ||..|   |..|::::.|..       
plant     3 HPNMFESHHMFDMTPKSTS--DNDLGITGSREDDFETKSGTEVTTENPSGEELQDPSQRPNKKKR 65

  Fly   130 --IYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRR---------------- 176
              .::..|:|:|...|:...:....:|.||:..|.|...|||.||||:|                
plant    66 YHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILK 130

  Fly   177 ----------SKYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMH 213
                      ::||:.:       :|:..|..||....|:.|.::.|
plant   131 SDNDKLRAENNRYKEAL-------SNATCPNCGGPAAIGEMSFDEQH 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 19/90 (21%)
PDF2NP_567274.1 Homeodomain 63..118 CDD:459649 17/54 (31%)
START_ArGLABRA2_like 248..472 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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