DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and HDG8

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_186976.2 Gene:HDG8 / 821305 AraportID:AT3G03260 Length:699 Species:Arabidopsis thaliana


Alignment Length:220 Identity:52/220 - (23%)
Similarity:71/220 - (32%) Gaps:93/220 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 NGKGKKMRKPRTI--YSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK 180
            |||       ||.  ::..|:|:|...|:...:....:|.:|...|.|...|:|.||||:|::  
plant    22 NGK-------RTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQ-- 77

  Fly   181 KMMKAAQGPGTNSGMPLGG------------------------GGPNPG---------------- 205
              .|..:...||  :.|.|                        |||..|                
plant    78 --SKTQEDRSTN--VLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQKLRFENA 138

  Fly   206 --------------QHSPNQMHSGELANGRFLWAALETNGTLALVHS----TGGNNGGGSNSGSP 252
                          ||.||:.               ....:||.|.|    :.|.|||.....| 
plant   139 RLKDHRDRISNFVDQHKPNEP---------------TVEDSLAYVPSLDRISYGINGGNMYEPS- 187

  Fly   253 SHYLPPGH---SPTP-SSTPVSELS 273
            |.|.||..   .|.| :.|.:|.||
plant   188 SSYGPPNFQIIQPRPLAETDMSLLS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 17/57 (30%)
HDG8NP_186976.2 Homeodomain 24..79 CDD:459649 18/65 (28%)
START_ArGLABRA2_like 208..434 CDD:176884 3/5 (60%)
SRPBCC 486..664 CDD:472699
Blue background indicates that the domain is not in the aligned region.

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