DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and HB20

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_186771.1 Gene:HB20 / 821232 AraportID:AT3G01220 Length:286 Species:Arabidopsis thaliana


Alignment Length:149 Identity:36/149 - (24%)
Similarity:58/149 - (38%) Gaps:53/149 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPK------------------------- 101
            :..||..    |:.|..:|:::..     ...|.|  ||.                         
plant    15 EMAFPQH----GFMFQQLHEDNSQ-----DQLPSC--PPHLFNGGGNYMMNRSMSLMNVQEDHNQ 68

  Fly   102 --DDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQ---LNRRFQRTQYLALPERAELAASL 161
              |:.::||   |....:.|:.||         .|||:|   |.:.|:....|....:.:||.:|
plant    69 TLDEENLSD---DGAHTMLGEKKK---------RLQLEQVKALEKSFELGNKLEPERKIQLAKAL 121

  Fly   162 GLTQTQVKIWFQNRRSKYK 180
            |:...|:.|||||||:::|
plant   122 GMQPRQIAIWFQNRRARWK 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 20/59 (34%)
HB20NP_186771.1 Homeodomain 87..140 CDD:459649 21/61 (34%)
HALZ 142..183 CDD:460477
Blue background indicates that the domain is not in the aligned region.

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